Protein–RNA interactions for Protein: Q62189

Snrpa, U1 small nuclear ribonucleoprotein A, mousemouse

Known RBP Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpaQ62189 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SnrpaQ62189 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SnrpaQ62189 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SnrpaQ62189 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SnrpaQ62189 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SnrpaQ62189 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SnrpaQ62189 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SnrpaQ62189 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SnrpaQ62189 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SnrpaQ62189 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SnrpaQ62189 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.95■□□□□ 0.62
SnrpaQ62189 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.95■□□□□ 0.62
SnrpaQ62189 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SnrpaQ62189 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SnrpaQ62189 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SnrpaQ62189 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SnrpaQ62189 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SnrpaQ62189 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SnrpaQ62189 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SnrpaQ62189 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SnrpaQ62189 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.94■□□□□ 0.62
SnrpaQ62189 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SnrpaQ62189 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SnrpaQ62189 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.94■□□□□ 0.62
SnrpaQ62189 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SnrpaQ62189 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
SnrpaQ62189 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.94■□□□□ 0.62
SnrpaQ62189 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SnrpaQ62189 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SnrpaQ62189 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SnrpaQ62189 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SnrpaQ62189 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.93■□□□□ 0.62
SnrpaQ62189 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SnrpaQ62189 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SnrpaQ62189 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SnrpaQ62189 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.93■□□□□ 0.62
SnrpaQ62189 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SnrpaQ62189 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SnrpaQ62189 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.93■□□□□ 0.62
SnrpaQ62189 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SnrpaQ62189 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SnrpaQ62189 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SnrpaQ62189 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SnrpaQ62189 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.92■□□□□ 0.62
SnrpaQ62189 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SnrpaQ62189 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SnrpaQ62189 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
SnrpaQ62189 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.92■□□□□ 0.62
SnrpaQ62189 Grk6-206ENSMUST00000224995 2971 ntBASIC18.92■□□□□ 0.62
SnrpaQ62189 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.92■□□□□ 0.62
SnrpaQ62189 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SnrpaQ62189 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
SnrpaQ62189 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SnrpaQ62189 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
SnrpaQ62189 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SnrpaQ62189 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SnrpaQ62189 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SnrpaQ62189 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SnrpaQ62189 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.91■□□□□ 0.62
SnrpaQ62189 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SnrpaQ62189 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SnrpaQ62189 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.91■□□□□ 0.62
SnrpaQ62189 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SnrpaQ62189 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SnrpaQ62189 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SnrpaQ62189 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.91■□□□□ 0.62
SnrpaQ62189 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SnrpaQ62189 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SnrpaQ62189 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.9■□□□□ 0.62
SnrpaQ62189 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SnrpaQ62189 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SnrpaQ62189 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.9■□□□□ 0.62
SnrpaQ62189 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.9■□□□□ 0.62
SnrpaQ62189 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SnrpaQ62189 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SnrpaQ62189 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SnrpaQ62189 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SnrpaQ62189 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SnrpaQ62189 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SnrpaQ62189 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SnrpaQ62189 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.9■□□□□ 0.62
SnrpaQ62189 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SnrpaQ62189 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SnrpaQ62189 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SnrpaQ62189 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SnrpaQ62189 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SnrpaQ62189 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SnrpaQ62189 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.89■□□□□ 0.61
SnrpaQ62189 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SnrpaQ62189 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.89■□□□□ 0.61
SnrpaQ62189 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SnrpaQ62189 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SnrpaQ62189 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SnrpaQ62189 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SnrpaQ62189 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SnrpaQ62189 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SnrpaQ62189 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SnrpaQ62189 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SnrpaQ62189 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SnrpaQ62189 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms