Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.7■■□□□ 1.06
Foxn1Q61575 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Foxn1Q61575 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxn1Q61575 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxn1Q61575 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxn1Q61575 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Foxn1Q61575 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxn1Q61575 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.7■■□□□ 1.06
Foxn1Q61575 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.7■■□□□ 1.06
Foxn1Q61575 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxn1Q61575 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.7■■□□□ 1.06
Foxn1Q61575 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxn1Q61575 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Foxn1Q61575 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxn1Q61575 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxn1Q61575 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxn1Q61575 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.69■■□□□ 1.06
Foxn1Q61575 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Foxn1Q61575 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Foxn1Q61575 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Foxn1Q61575 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Foxn1Q61575 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
Foxn1Q61575 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC21.69■■□□□ 1.06
Foxn1Q61575 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxn1Q61575 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxn1Q61575 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Foxn1Q61575 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Foxn1Q61575 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Foxn1Q61575 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Foxn1Q61575 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Foxn1Q61575 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.68■■□□□ 1.06
Foxn1Q61575 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Foxn1Q61575 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Foxn1Q61575 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Foxn1Q61575 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.68■■□□□ 1.06
Foxn1Q61575 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Foxn1Q61575 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Foxn1Q61575 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxn1Q61575 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxn1Q61575 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.67■■□□□ 1.06
Foxn1Q61575 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxn1Q61575 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Foxn1Q61575 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxn1Q61575 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Foxn1Q61575 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Foxn1Q61575 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Foxn1Q61575 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Foxn1Q61575 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Foxn1Q61575 Gm13559-201ENSMUST00000120476 863 ntBASIC21.66■■□□□ 1.06
Foxn1Q61575 Gm21814-202ENSMUST00000203277 873 ntBASIC21.66■■□□□ 1.06
Foxn1Q61575 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxn1Q61575 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxn1Q61575 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Foxn1Q61575 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Foxn1Q61575 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Foxn1Q61575 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Foxn1Q61575 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Foxn1Q61575 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Foxn1Q61575 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Foxn1Q61575 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Foxn1Q61575 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Foxn1Q61575 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Foxn1Q61575 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Foxn1Q61575 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Foxn1Q61575 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Foxn1Q61575 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Foxn1Q61575 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Foxn1Q61575 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Foxn1Q61575 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Foxn1Q61575 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.64■■□□□ 1.05
Foxn1Q61575 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.64■■□□□ 1.05
Foxn1Q61575 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Foxn1Q61575 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Foxn1Q61575 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.64■■□□□ 1.05
Foxn1Q61575 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Foxn1Q61575 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxn1Q61575 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxn1Q61575 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Foxn1Q61575 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxn1Q61575 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxn1Q61575 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.63■■□□□ 1.05
Foxn1Q61575 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxn1Q61575 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxn1Q61575 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxn1Q61575 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxn1Q61575 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.63■■□□□ 1.05
Foxn1Q61575 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Foxn1Q61575 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Foxn1Q61575 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Foxn1Q61575 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxn1Q61575 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxn1Q61575 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Foxn1Q61575 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Foxn1Q61575 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Foxn1Q61575 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Foxn1Q61575 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.61■■□□□ 1.05
Foxn1Q61575 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.61■■□□□ 1.05
Foxn1Q61575 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.61■■□□□ 1.05
Foxn1Q61575 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Foxn1Q61575 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms