Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.71■□□□□ 0.43
Sox17Q61473 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox17Q61473 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sox17Q61473 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sox17Q61473 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox17Q61473 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox17Q61473 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.7■□□□□ 0.42
Sox17Q61473 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox17Q61473 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox17Q61473 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox17Q61473 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox17Q61473 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox17Q61473 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sox17Q61473 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sox17Q61473 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.7■□□□□ 0.42
Sox17Q61473 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.7■□□□□ 0.42
Sox17Q61473 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sox17Q61473 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox17Q61473 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox17Q61473 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sox17Q61473 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.69■□□□□ 0.42
Sox17Q61473 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sox17Q61473 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox17Q61473 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox17Q61473 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox17Q61473 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox17Q61473 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox17Q61473 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sox17Q61473 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sox17Q61473 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox17Q61473 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox17Q61473 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.68■□□□□ 0.42
Sox17Q61473 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox17Q61473 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sox17Q61473 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sox17Q61473 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox17Q61473 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox17Q61473 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox17Q61473 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sox17Q61473 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sox17Q61473 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.67■□□□□ 0.42
Sox17Q61473 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.67■□□□□ 0.42
Sox17Q61473 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox17Q61473 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sox17Q61473 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.65■□□□□ 0.42
Sox17Q61473 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.65■□□□□ 0.42
Sox17Q61473 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox17Q61473 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sox17Q61473 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sox17Q61473 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.65■□□□□ 0.42
Sox17Q61473 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox17Q61473 Serp2-204ENSMUST00000228055 705 ntBASIC17.65■□□□□ 0.42
Sox17Q61473 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox17Q61473 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox17Q61473 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox17Q61473 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox17Q61473 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox17Q61473 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sox17Q61473 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Sox17Q61473 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sox17Q61473 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
Sox17Q61473 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Sox17Q61473 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox17Q61473 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox17Q61473 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.64■□□□□ 0.41
Sox17Q61473 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Sox17Q61473 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox17Q61473 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox17Q61473 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sox17Q61473 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.64■□□□□ 0.41
Sox17Q61473 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sox17Q61473 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sox17Q61473 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sox17Q61473 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox17Q61473 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Sox17Q61473 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms