Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.12■□□□□ 0.65
Six4Q61321 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Six4Q61321 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six4Q61321 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Six4Q61321 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six4Q61321 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Six4Q61321 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six4Q61321 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.11■□□□□ 0.65
Six4Q61321 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six4Q61321 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six4Q61321 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.11■□□□□ 0.65
Six4Q61321 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six4Q61321 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six4Q61321 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six4Q61321 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six4Q61321 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Six4Q61321 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.1■□□□□ 0.65
Six4Q61321 Gm42569-201ENSMUST00000200539 472 ntBASIC19.1■□□□□ 0.65
Six4Q61321 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.1■□□□□ 0.65
Six4Q61321 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.1■□□□□ 0.65
Six4Q61321 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six4Q61321 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Six4Q61321 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six4Q61321 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Six4Q61321 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six4Q61321 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Six4Q61321 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six4Q61321 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six4Q61321 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six4Q61321 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six4Q61321 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Six4Q61321 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Six4Q61321 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six4Q61321 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six4Q61321 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.09■□□□□ 0.65
Six4Q61321 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.09■□□□□ 0.65
Six4Q61321 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six4Q61321 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.09■□□□□ 0.65
Six4Q61321 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six4Q61321 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six4Q61321 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Six4Q61321 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six4Q61321 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six4Q61321 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six4Q61321 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Six4Q61321 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Six4Q61321 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six4Q61321 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six4Q61321 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six4Q61321 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Six4Q61321 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six4Q61321 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six4Q61321 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.08■□□□□ 0.64
Six4Q61321 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six4Q61321 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six4Q61321 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Six4Q61321 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six4Q61321 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six4Q61321 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Six4Q61321 Golph3-205ENSMUST00000228671 2842 ntBASIC19.07■□□□□ 0.64
Six4Q61321 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Six4Q61321 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.07■□□□□ 0.64
Six4Q61321 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Six4Q61321 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six4Q61321 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six4Q61321 Gm7514-201ENSMUST00000209475 934 ntBASIC19.07■□□□□ 0.64
Six4Q61321 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six4Q61321 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Six4Q61321 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six4Q61321 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six4Q61321 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Six4Q61321 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Six4Q61321 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.07■□□□□ 0.64
Six4Q61321 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six4Q61321 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six4Q61321 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Six4Q61321 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Six4Q61321 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Six4Q61321 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six4Q61321 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six4Q61321 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Six4Q61321 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six4Q61321 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Six4Q61321 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.06■□□□□ 0.64
Six4Q61321 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Six4Q61321 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.05■□□□□ 0.64
Six4Q61321 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Six4Q61321 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms