Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.17■□□□□ 0.66
Sdf4Q61112 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.17■□□□□ 0.66
Sdf4Q61112 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.17■□□□□ 0.66
Sdf4Q61112 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdf4Q61112 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sdf4Q61112 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.17■□□□□ 0.66
Sdf4Q61112 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdf4Q61112 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Sdf4Q61112 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdf4Q61112 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdf4Q61112 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdf4Q61112 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Sdf4Q61112 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdf4Q61112 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdf4Q61112 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdf4Q61112 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdf4Q61112 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdf4Q61112 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sdf4Q61112 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdf4Q61112 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdf4Q61112 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sdf4Q61112 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Sdf4Q61112 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.15■□□□□ 0.66
Sdf4Q61112 Gm38205-201ENSMUST00000192243 258 ntBASIC19.15■□□□□ 0.66
Sdf4Q61112 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.15■□□□□ 0.66
Sdf4Q61112 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sdf4Q61112 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdf4Q61112 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdf4Q61112 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdf4Q61112 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Sdf4Q61112 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.14■□□□□ 0.65
Sdf4Q61112 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdf4Q61112 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
Sdf4Q61112 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.14■□□□□ 0.65
Sdf4Q61112 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdf4Q61112 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sdf4Q61112 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdf4Q61112 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sdf4Q61112 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdf4Q61112 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Sdf4Q61112 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sdf4Q61112 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sdf4Q61112 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdf4Q61112 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sdf4Q61112 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sdf4Q61112 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.13■□□□□ 0.65
Sdf4Q61112 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.13■□□□□ 0.65
Sdf4Q61112 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.13■□□□□ 0.65
Sdf4Q61112 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.13■□□□□ 0.65
Sdf4Q61112 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.13■□□□□ 0.65
Sdf4Q61112 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sdf4Q61112 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdf4Q61112 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdf4Q61112 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sdf4Q61112 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdf4Q61112 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sdf4Q61112 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdf4Q61112 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sdf4Q61112 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sdf4Q61112 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdf4Q61112 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.12■□□□□ 0.65
Sdf4Q61112 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sdf4Q61112 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sdf4Q61112 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.12■□□□□ 0.65
Sdf4Q61112 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Sdf4Q61112 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.12■□□□□ 0.65
Sdf4Q61112 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sdf4Q61112 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.11■□□□□ 0.65
Sdf4Q61112 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 Reep4-203ENSMUST00000226563 1444 ntBASIC19.11■□□□□ 0.65
Sdf4Q61112 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Sdf4Q61112 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 Gm42778-201ENSMUST00000199644 553 ntBASIC19.11■□□□□ 0.65
Sdf4Q61112 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Sdf4Q61112 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Sdf4Q61112 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Sdf4Q61112 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sdf4Q61112 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms