Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Foxf1Q61080 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Foxf1Q61080 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Foxf1Q61080 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Foxf1Q61080 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Foxf1Q61080 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Foxf1Q61080 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Foxf1Q61080 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Foxf1Q61080 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.81■□□□□ 0.12
Foxf1Q61080 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.81■□□□□ 0.12
Foxf1Q61080 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Foxf1Q61080 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.81■□□□□ 0.12
Foxf1Q61080 BC021767-201ENSMUST00000126387 1716 ntBASIC15.81■□□□□ 0.12
Foxf1Q61080 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Foxf1Q61080 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.81■□□□□ 0.12
Foxf1Q61080 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Foxf1Q61080 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Foxf1Q61080 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Foxf1Q61080 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Foxf1Q61080 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Foxf1Q61080 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Foxf1Q61080 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Foxf1Q61080 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Foxf1Q61080 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.8■□□□□ 0.12
Foxf1Q61080 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Foxf1Q61080 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.8■□□□□ 0.12
Foxf1Q61080 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Foxf1Q61080 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Foxf1Q61080 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.8■□□□□ 0.12
Foxf1Q61080 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Foxf1Q61080 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Foxf1Q61080 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Foxf1Q61080 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.79■□□□□ 0.12
Foxf1Q61080 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Foxf1Q61080 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.79■□□□□ 0.12
Foxf1Q61080 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.79■□□□□ 0.12
Foxf1Q61080 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.79■□□□□ 0.12
Foxf1Q61080 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Foxf1Q61080 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Foxf1Q61080 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Foxf1Q61080 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Foxf1Q61080 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxf1Q61080 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxf1Q61080 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Foxf1Q61080 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxf1Q61080 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.78■□□□□ 0.12
Foxf1Q61080 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Foxf1Q61080 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Foxf1Q61080 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Foxf1Q61080 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Foxf1Q61080 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Foxf1Q61080 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxf1Q61080 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxf1Q61080 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxf1Q61080 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxf1Q61080 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxf1Q61080 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxf1Q61080 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.77■□□□□ 0.12
Foxf1Q61080 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.77■□□□□ 0.12
Foxf1Q61080 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.77■□□□□ 0.12
Foxf1Q61080 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Foxf1Q61080 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Foxf1Q61080 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
Foxf1Q61080 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Foxf1Q61080 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.77■□□□□ 0.11
Foxf1Q61080 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Foxf1Q61080 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Foxf1Q61080 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Foxf1Q61080 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
Foxf1Q61080 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Foxf1Q61080 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms