Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sim1Q61045 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sim1Q61045 Gm7290-201ENSMUST00000104990 617 ntBASIC18.74■□□□□ 0.59
Sim1Q61045 Gm12918-201ENSMUST00000120234 636 ntBASIC18.74■□□□□ 0.59
Sim1Q61045 Gm15710-201ENSMUST00000121821 636 ntBASIC18.74■□□□□ 0.59
Sim1Q61045 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sim1Q61045 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sim1Q61045 Gm5075-201ENSMUST00000196916 622 ntBASIC18.74■□□□□ 0.59
Sim1Q61045 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sim1Q61045 Gm20049-201ENSMUST00000219950 730 ntBASIC18.74■□□□□ 0.59
Sim1Q61045 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.74■□□□□ 0.59
Sim1Q61045 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.74■□□□□ 0.59
Sim1Q61045 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sim1Q61045 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sim1Q61045 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sim1Q61045 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sim1Q61045 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sim1Q61045 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sim1Q61045 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim1Q61045 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim1Q61045 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim1Q61045 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim1Q61045 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim1Q61045 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.73■□□□□ 0.59
Sim1Q61045 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim1Q61045 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
Sim1Q61045 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sim1Q61045 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sim1Q61045 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sim1Q61045 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sim1Q61045 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sim1Q61045 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.72■□□□□ 0.59
Sim1Q61045 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Sim1Q61045 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sim1Q61045 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sim1Q61045 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sim1Q61045 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sim1Q61045 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Sim1Q61045 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.72■□□□□ 0.59
Sim1Q61045 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sim1Q61045 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.71■□□□□ 0.59
Sim1Q61045 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sim1Q61045 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.71■□□□□ 0.59
Sim1Q61045 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.71■□□□□ 0.59
Sim1Q61045 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.71■□□□□ 0.59
Sim1Q61045 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sim1Q61045 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sim1Q61045 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sim1Q61045 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sim1Q61045 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sim1Q61045 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Sim1Q61045 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.7■□□□□ 0.58
Sim1Q61045 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.7■□□□□ 0.58
Sim1Q61045 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.7■□□□□ 0.58
Sim1Q61045 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sim1Q61045 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.69■□□□□ 0.58
Sim1Q61045 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.69■□□□□ 0.58
Sim1Q61045 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sim1Q61045 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sim1Q61045 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sim1Q61045 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sim1Q61045 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sim1Q61045 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sim1Q61045 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.68■□□□□ 0.58
Sim1Q61045 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sim1Q61045 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.68■□□□□ 0.58
Sim1Q61045 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sim1Q61045 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sim1Q61045 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.68■□□□□ 0.58
Sim1Q61045 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sim1Q61045 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Sim1Q61045 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sim1Q61045 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sim1Q61045 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sim1Q61045 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sim1Q61045 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sim1Q61045 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sim1Q61045 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.67■□□□□ 0.58
Sim1Q61045 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sim1Q61045 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sim1Q61045 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sim1Q61045 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sim1Q61045 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.67■□□□□ 0.58
Sim1Q61045 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sim1Q61045 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sim1Q61045 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sim1Q61045 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sim1Q61045 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sim1Q61045 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms