Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Gm13146-201ENSMUST00000118508 780 ntBASIC19.48■□□□□ 0.71
Satb1Q60611 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Satb1Q60611 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.48■□□□□ 0.71
Satb1Q60611 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Satb1Q60611 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Satb1Q60611 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Satb1Q60611 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Satb1Q60611 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Satb1Q60611 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.47■□□□□ 0.71
Satb1Q60611 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Satb1Q60611 Gm15565-201ENSMUST00000118890 427 ntBASIC19.47■□□□□ 0.71
Satb1Q60611 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Satb1Q60611 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Satb1Q60611 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Satb1Q60611 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Satb1Q60611 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Satb1Q60611 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Satb1Q60611 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Satb1Q60611 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Satb1Q60611 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Satb1Q60611 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Satb1Q60611 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Satb1Q60611 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Satb1Q60611 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Satb1Q60611 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Satb1Q60611 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Satb1Q60611 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Satb1Q60611 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Satb1Q60611 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Satb1Q60611 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Satb1Q60611 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Satb1Q60611 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Satb1Q60611 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Satb1Q60611 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Satb1Q60611 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Satb1Q60611 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Satb1Q60611 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Satb1Q60611 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Satb1Q60611 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Satb1Q60611 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.44■□□□□ 0.7
Satb1Q60611 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Satb1Q60611 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Satb1Q60611 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Satb1Q60611 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.44■□□□□ 0.7
Satb1Q60611 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.44■□□□□ 0.7
Satb1Q60611 Gm27275-201ENSMUST00000184318 272 ntBASIC19.44■□□□□ 0.7
Satb1Q60611 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Satb1Q60611 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Satb1Q60611 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.44■□□□□ 0.7
Satb1Q60611 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Satb1Q60611 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Satb1Q60611 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Satb1Q60611 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Satb1Q60611 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Satb1Q60611 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Satb1Q60611 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Satb1Q60611 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Satb1Q60611 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Satb1Q60611 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Satb1Q60611 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.43■□□□□ 0.7
Satb1Q60611 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Satb1Q60611 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Satb1Q60611 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Satb1Q60611 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Satb1Q60611 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Satb1Q60611 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.42■□□□□ 0.7
Satb1Q60611 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.42■□□□□ 0.7
Satb1Q60611 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.42■□□□□ 0.7
Satb1Q60611 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.42■□□□□ 0.7
Satb1Q60611 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.42■□□□□ 0.7
Satb1Q60611 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Satb1Q60611 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Satb1Q60611 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Satb1Q60611 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Satb1Q60611 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Satb1Q60611 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Satb1Q60611 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Satb1Q60611 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Satb1Q60611 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Satb1Q60611 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Satb1Q60611 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.42■□□□□ 0.7
Satb1Q60611 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Satb1Q60611 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Satb1Q60611 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Satb1Q60611 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Satb1Q60611 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Satb1Q60611 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Satb1Q60611 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Satb1Q60611 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Satb1Q60611 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Satb1Q60611 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Satb1Q60611 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Satb1Q60611 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Satb1Q60611 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Satb1Q60611 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Satb1Q60611 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Satb1Q60611 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Satb1Q60611 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Satb1Q60611 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Satb1Q60611 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms