Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim38Q5SZ99 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Trim38Q5SZ99 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.58■□□□□ 0.72
Trim38Q5SZ99 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim38Q5SZ99 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim38Q5SZ99 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim38Q5SZ99 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim38Q5SZ99 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim38Q5SZ99 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim38Q5SZ99 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.57■□□□□ 0.72
Trim38Q5SZ99 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim38Q5SZ99 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.57■□□□□ 0.72
Trim38Q5SZ99 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim38Q5SZ99 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim38Q5SZ99 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim38Q5SZ99 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim38Q5SZ99 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.57■□□□□ 0.72
Trim38Q5SZ99 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim38Q5SZ99 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim38Q5SZ99 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim38Q5SZ99 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim38Q5SZ99 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim38Q5SZ99 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim38Q5SZ99 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trim38Q5SZ99 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms