Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.03■□□□□ -0
Trav2Q5R1I9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.03■□□□□ -0
Trav2Q5R1I9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Gm6365-201ENSMUST00000054711 744 ntBASIC15.03■□□□□ -0
Trav2Q5R1I9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav2Q5R1I9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav2Q5R1I9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.03■□□□□ -0
Trav2Q5R1I9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav2Q5R1I9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav2Q5R1I9 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.02■□□□□ -0
Trav2Q5R1I9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav2Q5R1I9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav2Q5R1I9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav2Q5R1I9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav2Q5R1I9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav2Q5R1I9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav2Q5R1I9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav2Q5R1I9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav2Q5R1I9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15□□□□□ -0.01
Trav2Q5R1I9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav2Q5R1I9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav2Q5R1I9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav2Q5R1I9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav2Q5R1I9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav2Q5R1I9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav2Q5R1I9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav2Q5R1I9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Trav2Q5R1I9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav2Q5R1I9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15□□□□□ -0.01
Trav2Q5R1I9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav2Q5R1I9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav2Q5R1I9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav2Q5R1I9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav2Q5R1I9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav2Q5R1I9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
Trav2Q5R1I9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav2Q5R1I9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav2Q5R1I9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav2Q5R1I9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav2Q5R1I9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav2Q5R1I9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms