Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vps41Q5KU39 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Vps41Q5KU39 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps41Q5KU39 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps41Q5KU39 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps41Q5KU39 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Vps41Q5KU39 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps41Q5KU39 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps41Q5KU39 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps41Q5KU39 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Vps41Q5KU39 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps41Q5KU39 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps41Q5KU39 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps41Q5KU39 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Vps41Q5KU39 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps41Q5KU39 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps41Q5KU39 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps41Q5KU39 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Vps41Q5KU39 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps41Q5KU39 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps41Q5KU39 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Vps41Q5KU39 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Vps41Q5KU39 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vps41Q5KU39 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.65■□□□□ 0.74
Vps41Q5KU39 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Golgb1-201ENSMUST00000023534 498 ntBASIC19.65■□□□□ 0.74
Vps41Q5KU39 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.65■□□□□ 0.74
Vps41Q5KU39 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Vps41Q5KU39 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Vps41Q5KU39 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vps41Q5KU39 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps41Q5KU39 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps41Q5KU39 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vps41Q5KU39 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.64■□□□□ 0.73
Vps41Q5KU39 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps41Q5KU39 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps41Q5KU39 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps41Q5KU39 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps41Q5KU39 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vps41Q5KU39 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.64■□□□□ 0.73
Vps41Q5KU39 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps41Q5KU39 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vps41Q5KU39 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.63■□□□□ 0.73
Vps41Q5KU39 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps41Q5KU39 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.63■□□□□ 0.73
Vps41Q5KU39 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps41Q5KU39 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vps41Q5KU39 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vps41Q5KU39 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps41Q5KU39 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Vps41Q5KU39 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps41Q5KU39 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps41Q5KU39 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps41Q5KU39 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps41Q5KU39 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps41Q5KU39 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps41Q5KU39 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps41Q5KU39 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps41Q5KU39 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.6■□□□□ 0.73
Vps41Q5KU39 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Vps41Q5KU39 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms