Protein–RNA interactions for Protein: Q52KR3

Prune2, Protein prune homolog 2, mousemouse

Predictions only

Length 3,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prune2Q52KR3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Prune2Q52KR3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prune2Q52KR3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Prune2Q52KR3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Prune2Q52KR3 Gm17971-201ENSMUST00000190239 806 ntBASIC17.87■□□□□ 0.45
Prune2Q52KR3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Prune2Q52KR3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prune2Q52KR3 AA386476-201ENSMUST00000098781 1665 ntBASIC17.86■□□□□ 0.45
Prune2Q52KR3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prune2Q52KR3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.86■□□□□ 0.45
Prune2Q52KR3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prune2Q52KR3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Prune2Q52KR3 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prune2Q52KR3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Prune2Q52KR3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prune2Q52KR3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Prune2Q52KR3 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.85■□□□□ 0.45
Prune2Q52KR3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.85■□□□□ 0.45
Prune2Q52KR3 Gm21814-202ENSMUST00000203277 873 ntBASIC17.85■□□□□ 0.45
Prune2Q52KR3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prune2Q52KR3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Prune2Q52KR3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prune2Q52KR3 Gm7889-201ENSMUST00000185591 958 ntBASIC17.85■□□□□ 0.45
Prune2Q52KR3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Prune2Q52KR3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prune2Q52KR3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Prune2Q52KR3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prune2Q52KR3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prune2Q52KR3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Prune2Q52KR3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.85■□□□□ 0.45
Prune2Q52KR3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Prune2Q52KR3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prune2Q52KR3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prune2Q52KR3 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.84■□□□□ 0.45
Prune2Q52KR3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prune2Q52KR3 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prune2Q52KR3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prune2Q52KR3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prune2Q52KR3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prune2Q52KR3 Gm23634-201ENSMUST00000175071 91 ntBASIC17.84■□□□□ 0.45
Prune2Q52KR3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Prune2Q52KR3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prune2Q52KR3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Prune2Q52KR3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Prune2Q52KR3 Gm6345-202ENSMUST00000180900 204 ntBASIC17.83■□□□□ 0.45
Prune2Q52KR3 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.83■□□□□ 0.45
Prune2Q52KR3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.83■□□□□ 0.45
Prune2Q52KR3 Gm25925-201ENSMUST00000158314 306 ntBASIC17.83■□□□□ 0.44
Prune2Q52KR3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prune2Q52KR3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prune2Q52KR3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Prune2Q52KR3 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.83■□□□□ 0.44
Prune2Q52KR3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Prune2Q52KR3 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.83■□□□□ 0.44
Prune2Q52KR3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Prune2Q52KR3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prune2Q52KR3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prune2Q52KR3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prune2Q52KR3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Prune2Q52KR3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.81■□□□□ 0.44
Prune2Q52KR3 Gm11539-201ENSMUST00000119837 557 ntBASIC17.81■□□□□ 0.44
Prune2Q52KR3 Gm13436-201ENSMUST00000120418 567 ntBASIC17.81■□□□□ 0.44
Prune2Q52KR3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Prune2Q52KR3 Gm13158-201ENSMUST00000122007 736 ntBASIC17.8■□□□□ 0.44
Prune2Q52KR3 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.8■□□□□ 0.44
Prune2Q52KR3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Gm33142-201ENSMUST00000193913 867 ntBASIC17.8■□□□□ 0.44
Prune2Q52KR3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Prune2Q52KR3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prune2Q52KR3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prune2Q52KR3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Prune2Q52KR3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prune2Q52KR3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Prune2Q52KR3 Gm30025-201ENSMUST00000218555 728 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms