Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tmem40Q4FJU9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Gm13146-201ENSMUST00000118508 780 ntBASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tmem40Q4FJU9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 Gm38205-201ENSMUST00000192243 258 ntBASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 Gm6420-201ENSMUST00000193885 723 ntBASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tmem40Q4FJU9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tmem40Q4FJU9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tmem40Q4FJU9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tmem40Q4FJU9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Tmem40Q4FJU9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Tmem40Q4FJU9 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Tmem40Q4FJU9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
Tmem40Q4FJU9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tmem40Q4FJU9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tmem40Q4FJU9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tmem40Q4FJU9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tmem40Q4FJU9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tmem40Q4FJU9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Tmem40Q4FJU9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Gm13168-201ENSMUST00000121771 632 ntBASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Tmem40Q4FJU9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem40Q4FJU9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem40Q4FJU9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem40Q4FJU9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem40Q4FJU9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem40Q4FJU9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Tmem40Q4FJU9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16■□□□□ 0.15
Tmem40Q4FJU9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tmem40Q4FJU9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16■□□□□ 0.15
Tmem40Q4FJU9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Tmem40Q4FJU9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Tmem40Q4FJU9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Tmem40Q4FJU9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem40Q4FJU9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem40Q4FJU9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem40Q4FJU9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem40Q4FJU9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem40Q4FJU9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem40Q4FJU9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem40Q4FJU9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem40Q4FJU9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem40Q4FJU9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Tmem40Q4FJU9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Tmem40Q4FJU9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms