Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Rnf223Q3UV31 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rnf223Q3UV31 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rnf223Q3UV31 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.39■□□□□ 0.53
Rnf223Q3UV31 Gm4968-201ENSMUST00000071458 858 ntBASIC18.39■□□□□ 0.53
Rnf223Q3UV31 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf223Q3UV31 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf223Q3UV31 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf223Q3UV31 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rnf223Q3UV31 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.39■□□□□ 0.53
Rnf223Q3UV31 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rnf223Q3UV31 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Golph3-202ENSMUST00000226517 2359 ntBASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf223Q3UV31 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Gm12441-201ENSMUST00000121806 588 ntBASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Gm5408-201ENSMUST00000197998 747 ntBASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rnf223Q3UV31 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf223Q3UV31 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf223Q3UV31 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Rnf223Q3UV31 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rnf223Q3UV31 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.33■□□□□ 0.53
Rnf223Q3UV31 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf223Q3UV31 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.33■□□□□ 0.52
Rnf223Q3UV31 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf223Q3UV31 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf223Q3UV31 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf223Q3UV31 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf223Q3UV31 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rnf223Q3UV31 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rnf223Q3UV31 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf223Q3UV31 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms