Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Arhgef40Q3UPH7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC28.16■■■□□ 2.1
Arhgef40Q3UPH7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Arhgef40Q3UPH7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC28.16■■■□□ 2.1
Arhgef40Q3UPH7 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Arhgef40Q3UPH7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
Arhgef40Q3UPH7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Arhgef40Q3UPH7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Arhgef40Q3UPH7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Arhgef40Q3UPH7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Arhgef40Q3UPH7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Arhgef40Q3UPH7 Arhgef33-211ENSMUST00000225658 473 ntBASIC28.14■■■□□ 2.1
Arhgef40Q3UPH7 Gm5540-201ENSMUST00000131852 1848 ntBASIC28.14■■■□□ 2.09
Arhgef40Q3UPH7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Arhgef40Q3UPH7 AC153881.1-201ENSMUST00000214448 284 ntBASIC28.13■■■□□ 2.09
Arhgef40Q3UPH7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC28.13■■■□□ 2.09
Arhgef40Q3UPH7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Arhgef40Q3UPH7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC28.13■■■□□ 2.09
Arhgef40Q3UPH7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC28.13■■■□□ 2.09
Arhgef40Q3UPH7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
Arhgef40Q3UPH7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
Arhgef40Q3UPH7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Arhgef40Q3UPH7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Arhgef40Q3UPH7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Arhgef40Q3UPH7 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Arhgef40Q3UPH7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Arhgef40Q3UPH7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Arhgef40Q3UPH7 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Arhgef40Q3UPH7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC28.11■■■□□ 2.09
Arhgef40Q3UPH7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC28.11■■■□□ 2.09
Arhgef40Q3UPH7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC28.11■■■□□ 2.09
Arhgef40Q3UPH7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC28.11■■■□□ 2.09
Arhgef40Q3UPH7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Arhgef40Q3UPH7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Arhgef40Q3UPH7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC28.11■■■□□ 2.09
Arhgef40Q3UPH7 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Arhgef40Q3UPH7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 Gm15565-201ENSMUST00000118890 427 ntBASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Arhgef40Q3UPH7 Gm11643-201ENSMUST00000119578 864 ntBASIC28.09■■■□□ 2.09
Arhgef40Q3UPH7 Gm9484-201ENSMUST00000195892 1159 ntBASIC28.09■■■□□ 2.09
Arhgef40Q3UPH7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC28.09■■■□□ 2.09
Arhgef40Q3UPH7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC28.09■■■□□ 2.09
Arhgef40Q3UPH7 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Arhgef40Q3UPH7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Arhgef40Q3UPH7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
Arhgef40Q3UPH7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC28.08■■■□□ 2.09
Arhgef40Q3UPH7 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Arhgef40Q3UPH7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Arhgef40Q3UPH7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC28.08■■■□□ 2.09
Arhgef40Q3UPH7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Arhgef40Q3UPH7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC28.08■■■□□ 2.08
Arhgef40Q3UPH7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Arhgef40Q3UPH7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Arhgef40Q3UPH7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Arhgef40Q3UPH7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Arhgef40Q3UPH7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Arhgef40Q3UPH7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC28.07■■■□□ 2.08
Arhgef40Q3UPH7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Arhgef40Q3UPH7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef40Q3UPH7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef40Q3UPH7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef40Q3UPH7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef40Q3UPH7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
Arhgef40Q3UPH7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef40Q3UPH7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef40Q3UPH7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef40Q3UPH7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef40Q3UPH7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Arhgef40Q3UPH7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Arhgef40Q3UPH7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Arhgef40Q3UPH7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC28.05■■■□□ 2.08
Arhgef40Q3UPH7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC28.05■■■□□ 2.08
Arhgef40Q3UPH7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Arhgef40Q3UPH7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Arhgef40Q3UPH7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Arhgef40Q3UPH7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC28.04■■■□□ 2.08
Arhgef40Q3UPH7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC28.04■■■□□ 2.08
Arhgef40Q3UPH7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
Arhgef40Q3UPH7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Arhgef40Q3UPH7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Arhgef40Q3UPH7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC28.04■■■□□ 2.08
Arhgef40Q3UPH7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Arhgef40Q3UPH7 Nrn1-203ENSMUST00000223611 1443 ntBASIC28.04■■■□□ 2.08
Arhgef40Q3UPH7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Arhgef40Q3UPH7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
Arhgef40Q3UPH7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Arhgef40Q3UPH7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Arhgef40Q3UPH7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC28.03■■■□□ 2.08
Arhgef40Q3UPH7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Arhgef40Q3UPH7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms