Protein–RNA interactions for Protein: Q3UH53

Sdk1, Protein sidekick-1, mousemouse

Predictions only

Length 2,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdk1Q3UH53 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sdk1Q3UH53 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sdk1Q3UH53 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sdk1Q3UH53 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sdk1Q3UH53 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sdk1Q3UH53 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sdk1Q3UH53 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sdk1Q3UH53 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sdk1Q3UH53 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sdk1Q3UH53 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.05■□□□□ 0.16
Sdk1Q3UH53 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sdk1Q3UH53 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.05■□□□□ 0.16
Sdk1Q3UH53 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sdk1Q3UH53 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.04■□□□□ 0.16
Sdk1Q3UH53 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sdk1Q3UH53 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sdk1Q3UH53 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Sdk1Q3UH53 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sdk1Q3UH53 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.02■□□□□ 0.16
Sdk1Q3UH53 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sdk1Q3UH53 Gm10517-202ENSMUST00000192970 758 ntBASIC16.02■□□□□ 0.16
Sdk1Q3UH53 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.02■□□□□ 0.16
Sdk1Q3UH53 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.02■□□□□ 0.16
Sdk1Q3UH53 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sdk1Q3UH53 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Sdk1Q3UH53 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.02■□□□□ 0.15
Sdk1Q3UH53 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Sdk1Q3UH53 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Sdk1Q3UH53 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.02■□□□□ 0.15
Sdk1Q3UH53 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.02■□□□□ 0.15
Sdk1Q3UH53 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.02■□□□□ 0.15
Sdk1Q3UH53 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sdk1Q3UH53 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sdk1Q3UH53 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Sdk1Q3UH53 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16■□□□□ 0.15
Sdk1Q3UH53 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Sdk1Q3UH53 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16■□□□□ 0.15
Sdk1Q3UH53 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sdk1Q3UH53 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sdk1Q3UH53 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Sdk1Q3UH53 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sdk1Q3UH53 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sdk1Q3UH53 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sdk1Q3UH53 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sdk1Q3UH53 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sdk1Q3UH53 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms