Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col5a2Q3U962 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col5a2Q3U962 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
Col5a2Q3U962 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col5a2Q3U962 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC22.69■■□□□ 1.22
Col5a2Q3U962 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col5a2Q3U962 Alkbh1-212ENSMUST00000185301 408 ntBASIC22.69■■□□□ 1.22
Col5a2Q3U962 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.69■■□□□ 1.22
Col5a2Q3U962 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col5a2Q3U962 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.69■■□□□ 1.22
Col5a2Q3U962 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col5a2Q3U962 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col5a2Q3U962 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Col5a2Q3U962 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Col5a2Q3U962 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Col5a2Q3U962 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Col5a2Q3U962 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.68■■□□□ 1.22
Col5a2Q3U962 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Col5a2Q3U962 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
Col5a2Q3U962 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Col5a2Q3U962 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC22.67■■□□□ 1.22
Col5a2Q3U962 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col5a2Q3U962 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Col5a2Q3U962 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col5a2Q3U962 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col5a2Q3U962 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col5a2Q3U962 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.67■■□□□ 1.22
Col5a2Q3U962 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col5a2Q3U962 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Col5a2Q3U962 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Col5a2Q3U962 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC22.66■■□□□ 1.22
Col5a2Q3U962 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC22.66■■□□□ 1.22
Col5a2Q3U962 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col5a2Q3U962 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC22.66■■□□□ 1.22
Col5a2Q3U962 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col5a2Q3U962 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Col5a2Q3U962 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Col5a2Q3U962 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Col5a2Q3U962 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Col5a2Q3U962 Gm5417-201ENSMUST00000079706 384 ntBASIC22.66■■□□□ 1.22
Col5a2Q3U962 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Col5a2Q3U962 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Col5a2Q3U962 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC22.65■■□□□ 1.22
Col5a2Q3U962 Gm10459-201ENSMUST00000202708 1155 ntBASIC22.65■■□□□ 1.22
Col5a2Q3U962 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Col5a2Q3U962 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Col5a2Q3U962 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
Col5a2Q3U962 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col5a2Q3U962 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col5a2Q3U962 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Col5a2Q3U962 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col5a2Q3U962 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.63■■□□□ 1.21
Col5a2Q3U962 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Col5a2Q3U962 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
Col5a2Q3U962 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC22.63■■□□□ 1.21
Col5a2Q3U962 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Col5a2Q3U962 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC22.63■■□□□ 1.21
Col5a2Q3U962 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col5a2Q3U962 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col5a2Q3U962 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Col5a2Q3U962 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Col5a2Q3U962 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col5a2Q3U962 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Col5a2Q3U962 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col5a2Q3U962 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col5a2Q3U962 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col5a2Q3U962 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col5a2Q3U962 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.61■■□□□ 1.21
Col5a2Q3U962 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Col5a2Q3U962 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Col5a2Q3U962 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col5a2Q3U962 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col5a2Q3U962 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22.6■■□□□ 1.21
Col5a2Q3U962 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC22.6■■□□□ 1.21
Col5a2Q3U962 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col5a2Q3U962 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Col5a2Q3U962 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Col5a2Q3U962 Gm11927-201ENSMUST00000118472 759 ntBASIC22.6■■□□□ 1.21
Col5a2Q3U962 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Col5a2Q3U962 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC22.6■■□□□ 1.21
Col5a2Q3U962 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Col5a2Q3U962 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Col5a2Q3U962 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col5a2Q3U962 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.59■■□□□ 1.21
Col5a2Q3U962 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Col5a2Q3U962 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Col5a2Q3U962 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Col5a2Q3U962 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms