Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nhej1Q3KNJ2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nhej1Q3KNJ2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Nhej1Q3KNJ2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nhej1Q3KNJ2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nhej1Q3KNJ2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.1■□□□□ 0.81
Nhej1Q3KNJ2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nhej1Q3KNJ2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Nhej1Q3KNJ2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nhej1Q3KNJ2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nhej1Q3KNJ2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nhej1Q3KNJ2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Nhej1Q3KNJ2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Gm9847-201ENSMUST00000052528 599 ntBASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nhej1Q3KNJ2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nhej1Q3KNJ2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nhej1Q3KNJ2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nhej1Q3KNJ2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.08■□□□□ 0.81
Nhej1Q3KNJ2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nhej1Q3KNJ2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.08■□□□□ 0.81
Nhej1Q3KNJ2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.08■□□□□ 0.81
Nhej1Q3KNJ2 Gm43137-201ENSMUST00000198052 594 ntBASIC20.08■□□□□ 0.81
Nhej1Q3KNJ2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Nhej1Q3KNJ2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nhej1Q3KNJ2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nhej1Q3KNJ2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Nhej1Q3KNJ2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nhej1Q3KNJ2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Nhej1Q3KNJ2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.08■□□□□ 0.8
Nhej1Q3KNJ2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nhej1Q3KNJ2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nhej1Q3KNJ2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nhej1Q3KNJ2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nhej1Q3KNJ2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nhej1Q3KNJ2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nhej1Q3KNJ2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nhej1Q3KNJ2 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.05■□□□□ 0.8
Nhej1Q3KNJ2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Nhej1Q3KNJ2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nhej1Q3KNJ2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nhej1Q3KNJ2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nhej1Q3KNJ2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nhej1Q3KNJ2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms