Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Shroom4Q1W617 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC30.32■■■□□ 2.44
Shroom4Q1W617 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Shroom4Q1W617 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
Shroom4Q1W617 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Shroom4Q1W617 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC30.32■■■□□ 2.44
Shroom4Q1W617 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Shroom4Q1W617 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom4Q1W617 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom4Q1W617 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC30.31■■■□□ 2.44
Shroom4Q1W617 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom4Q1W617 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
Shroom4Q1W617 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom4Q1W617 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom4Q1W617 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Shroom4Q1W617 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC30.31■■■□□ 2.44
Shroom4Q1W617 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
Shroom4Q1W617 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Shroom4Q1W617 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Shroom4Q1W617 Gm15378-201ENSMUST00000121894 207 ntBASIC30.3■■■□□ 2.44
Shroom4Q1W617 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC30.3■■■□□ 2.44
Shroom4Q1W617 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Shroom4Q1W617 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
Shroom4Q1W617 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC30.29■■■□□ 2.44
Shroom4Q1W617 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Shroom4Q1W617 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Shroom4Q1W617 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Shroom4Q1W617 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Shroom4Q1W617 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Shroom4Q1W617 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shroom4Q1W617 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shroom4Q1W617 Mir5122-201ENSMUST00000175004 89 ntBASIC30.28■■■□□ 2.44
Shroom4Q1W617 Alkbh1-212ENSMUST00000185301 408 ntBASIC30.28■■■□□ 2.44
Shroom4Q1W617 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Shroom4Q1W617 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shroom4Q1W617 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shroom4Q1W617 Gm43006-201ENSMUST00000197702 1602 ntBASIC30.28■■■□□ 2.44
Shroom4Q1W617 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC30.27■■■□□ 2.44
Shroom4Q1W617 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC30.27■■■□□ 2.44
Shroom4Q1W617 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Shroom4Q1W617 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC30.26■■■□□ 2.44
Shroom4Q1W617 AC160393.1-201ENSMUST00000218378 1279 ntBASIC30.26■■■□□ 2.44
Shroom4Q1W617 AC175538.1-201ENSMUST00000225343 1269 ntBASIC30.26■■■□□ 2.44
Shroom4Q1W617 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Shroom4Q1W617 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Shroom4Q1W617 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC30.26■■■□□ 2.43
Shroom4Q1W617 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
Shroom4Q1W617 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Shroom4Q1W617 CT010444.2-201ENSMUST00000217877 1629 ntBASIC30.26■■■□□ 2.43
Shroom4Q1W617 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
Shroom4Q1W617 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Shroom4Q1W617 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC30.25■■■□□ 2.43
Shroom4Q1W617 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Shroom4Q1W617 H2-K2-201ENSMUST00000174250 1049 ntBASIC30.25■■■□□ 2.43
Shroom4Q1W617 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Shroom4Q1W617 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Shroom4Q1W617 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Shroom4Q1W617 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Shroom4Q1W617 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC30.24■■■□□ 2.43
Shroom4Q1W617 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC30.24■■■□□ 2.43
Shroom4Q1W617 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC30.24■■■□□ 2.43
Shroom4Q1W617 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Shroom4Q1W617 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Shroom4Q1W617 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Shroom4Q1W617 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC30.23■■■□□ 2.43
Shroom4Q1W617 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
Shroom4Q1W617 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Shroom4Q1W617 Gm11927-201ENSMUST00000118472 759 ntBASIC30.23■■■□□ 2.43
Shroom4Q1W617 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC30.23■■■□□ 2.43
Shroom4Q1W617 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Shroom4Q1W617 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
Shroom4Q1W617 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Shroom4Q1W617 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Shroom4Q1W617 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Shroom4Q1W617 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC30.22■■■□□ 2.43
Shroom4Q1W617 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Shroom4Q1W617 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Shroom4Q1W617 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC30.21■■■□□ 2.43
Shroom4Q1W617 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Shroom4Q1W617 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
Shroom4Q1W617 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Shroom4Q1W617 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Shroom4Q1W617 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Shroom4Q1W617 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Shroom4Q1W617 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Shroom4Q1W617 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Shroom4Q1W617 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC30.2■■■□□ 2.42
Shroom4Q1W617 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Shroom4Q1W617 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC30.19■■■□□ 2.42
Shroom4Q1W617 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC30.19■■■□□ 2.42
Shroom4Q1W617 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC30.19■■■□□ 2.42
Shroom4Q1W617 AC130671.1-201ENSMUST00000227384 1237 ntBASIC30.19■■■□□ 2.42
Shroom4Q1W617 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC30.19■■■□□ 2.42
Shroom4Q1W617 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Shroom4Q1W617 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Shroom4Q1W617 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC30.19■■■□□ 2.42
Shroom4Q1W617 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Shroom4Q1W617 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
Shroom4Q1W617 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
Shroom4Q1W617 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms