Protein–RNA interactions for Protein: Q0P678

Zc3h18, Zinc finger CCCH domain-containing protein 18, mousemouse

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h18Q0P678 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Zc3h18Q0P678 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zc3h18Q0P678 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.55■□□□□ 0.88
Zc3h18Q0P678 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.55■□□□□ 0.88
Zc3h18Q0P678 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.55■□□□□ 0.88
Zc3h18Q0P678 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zc3h18Q0P678 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Zc3h18Q0P678 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Zc3h18Q0P678 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zc3h18Q0P678 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.54■□□□□ 0.88
Zc3h18Q0P678 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Zc3h18Q0P678 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zc3h18Q0P678 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zc3h18Q0P678 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zc3h18Q0P678 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zc3h18Q0P678 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zc3h18Q0P678 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zc3h18Q0P678 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zc3h18Q0P678 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zc3h18Q0P678 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zc3h18Q0P678 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zc3h18Q0P678 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Zc3h18Q0P678 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.52■□□□□ 0.88
Zc3h18Q0P678 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.52■□□□□ 0.88
Zc3h18Q0P678 Gm9988-201ENSMUST00000069786 435 ntBASIC20.52■□□□□ 0.88
Zc3h18Q0P678 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Zc3h18Q0P678 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Zc3h18Q0P678 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Zc3h18Q0P678 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Reep4-203ENSMUST00000226563 1444 ntBASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zc3h18Q0P678 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.5■□□□□ 0.87
Zc3h18Q0P678 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h18Q0P678 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h18Q0P678 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h18Q0P678 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h18Q0P678 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h18Q0P678 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zc3h18Q0P678 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 213.9 ms