Protein–RNA interactions for Protein: Q08943

Ssrp1, FACT complex subunit SSRP1, mousemouse

Known RBP Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssrp1Q08943 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssrp1Q08943 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ssrp1Q08943 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.99■□□□□ 0.95
Ssrp1Q08943 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Ssrp1Q08943 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.99■□□□□ 0.95
Ssrp1Q08943 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ssrp1Q08943 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ssrp1Q08943 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ssrp1Q08943 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ssrp1Q08943 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ssrp1Q08943 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ssrp1Q08943 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ssrp1Q08943 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssrp1Q08943 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssrp1Q08943 Gm7860-201ENSMUST00000121190 879 ntBASIC20.98■□□□□ 0.95
Ssrp1Q08943 Gm43060-201ENSMUST00000200621 289 ntBASIC20.98■□□□□ 0.95
Ssrp1Q08943 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ssrp1Q08943 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ssrp1Q08943 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ssrp1Q08943 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Ssrp1Q08943 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Ssrp1Q08943 BC021767-201ENSMUST00000126387 1716 ntBASIC20.98■□□□□ 0.95
Ssrp1Q08943 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.98■□□□□ 0.95
Ssrp1Q08943 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Ssrp1Q08943 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssrp1Q08943 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.97■□□□□ 0.95
Ssrp1Q08943 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssrp1Q08943 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.97■□□□□ 0.95
Ssrp1Q08943 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssrp1Q08943 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.97■□□□□ 0.95
Ssrp1Q08943 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssrp1Q08943 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssrp1Q08943 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssrp1Q08943 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.97■□□□□ 0.95
Ssrp1Q08943 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssrp1Q08943 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ssrp1Q08943 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssrp1Q08943 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.96■□□□□ 0.95
Ssrp1Q08943 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.96■□□□□ 0.95
Ssrp1Q08943 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ssrp1Q08943 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssrp1Q08943 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ssrp1Q08943 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssrp1Q08943 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ssrp1Q08943 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssrp1Q08943 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssrp1Q08943 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.96■□□□□ 0.95
Ssrp1Q08943 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ssrp1Q08943 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ssrp1Q08943 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.95■□□□□ 0.94
Ssrp1Q08943 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssrp1Q08943 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.95■□□□□ 0.94
Ssrp1Q08943 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ssrp1Q08943 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ssrp1Q08943 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ssrp1Q08943 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ssrp1Q08943 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssrp1Q08943 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Ssrp1Q08943 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Ssrp1Q08943 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssrp1Q08943 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssrp1Q08943 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ssrp1Q08943 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssrp1Q08943 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ssrp1Q08943 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssrp1Q08943 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssrp1Q08943 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ssrp1Q08943 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssrp1Q08943 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ssrp1Q08943 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ssrp1Q08943 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.92■□□□□ 0.94
Ssrp1Q08943 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.92■□□□□ 0.94
Ssrp1Q08943 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ssrp1Q08943 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.92■□□□□ 0.94
Ssrp1Q08943 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssrp1Q08943 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ssrp1Q08943 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms