Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx4Q07424 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx4Q07424 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdx4Q07424 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx4Q07424 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.57□□□□□ -0.08
Cdx4Q07424 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.57□□□□□ -0.08
Cdx4Q07424 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.57□□□□□ -0.08
Cdx4Q07424 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.57□□□□□ -0.08
Cdx4Q07424 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx4Q07424 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx4Q07424 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.57□□□□□ -0.08
Cdx4Q07424 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx4Q07424 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx4Q07424 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx4Q07424 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx4Q07424 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Cdx4Q07424 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx4Q07424 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdx4Q07424 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Cdx4Q07424 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.56□□□□□ -0.08
Cdx4Q07424 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cdx4Q07424 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Cdx4Q07424 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cdx4Q07424 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.56□□□□□ -0.08
Cdx4Q07424 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cdx4Q07424 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.56□□□□□ -0.08
Cdx4Q07424 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Cdx4Q07424 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.56□□□□□ -0.08
Cdx4Q07424 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdx4Q07424 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdx4Q07424 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.55□□□□□ -0.08
Cdx4Q07424 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.55□□□□□ -0.08
Cdx4Q07424 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdx4Q07424 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx4Q07424 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx4Q07424 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx4Q07424 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdx4Q07424 Gm42569-201ENSMUST00000200539 472 ntBASIC14.54□□□□□ -0.08
Cdx4Q07424 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx4Q07424 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdx4Q07424 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx4Q07424 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx4Q07424 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cdx4Q07424 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx4Q07424 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx4Q07424 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdx4Q07424 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx4Q07424 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Cdx4Q07424 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx4Q07424 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx4Q07424 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx4Q07424 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.53□□□□□ -0.08
Cdx4Q07424 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.53□□□□□ -0.08
Cdx4Q07424 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx4Q07424 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.53□□□□□ -0.08
Cdx4Q07424 Gm18671-201ENSMUST00000214826 683 ntBASIC14.53□□□□□ -0.08
Cdx4Q07424 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx4Q07424 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx4Q07424 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx4Q07424 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.53□□□□□ -0.08
Cdx4Q07424 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdx4Q07424 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdx4Q07424 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cdx4Q07424 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
Cdx4Q07424 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdx4Q07424 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cdx4Q07424 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms