Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Col6a2Q02788 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a2Q02788 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Col6a2Q02788 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a2Q02788 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a2Q02788 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Col6a2Q02788 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.85■□□□□ 0.61
Col6a2Q02788 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a2Q02788 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.85■□□□□ 0.61
Col6a2Q02788 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.85■□□□□ 0.61
Col6a2Q02788 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.85■□□□□ 0.61
Col6a2Q02788 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col6a2Q02788 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Col6a2Q02788 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a2Q02788 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a2Q02788 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a2Q02788 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Col6a2Q02788 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a2Q02788 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Col6a2Q02788 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a2Q02788 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a2Q02788 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a2Q02788 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a2Q02788 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a2Q02788 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a2Q02788 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a2Q02788 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a2Q02788 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col6a2Q02788 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col6a2Q02788 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a2Q02788 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Col6a2Q02788 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Col6a2Q02788 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.83■□□□□ 0.6
Col6a2Q02788 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a2Q02788 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a2Q02788 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.83■□□□□ 0.6
Col6a2Q02788 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a2Q02788 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a2Q02788 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a2Q02788 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col6a2Q02788 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Col6a2Q02788 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a2Q02788 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.82■□□□□ 0.6
Col6a2Q02788 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a2Q02788 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a2Q02788 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a2Q02788 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col6a2Q02788 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.81■□□□□ 0.6
Col6a2Q02788 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.81■□□□□ 0.6
Col6a2Q02788 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.81■□□□□ 0.6
Col6a2Q02788 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.81■□□□□ 0.6
Col6a2Q02788 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.81■□□□□ 0.6
Col6a2Q02788 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Col6a2Q02788 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col6a2Q02788 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a2Q02788 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a2Q02788 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a2Q02788 Gm7290-201ENSMUST00000104990 617 ntBASIC18.8■□□□□ 0.6
Col6a2Q02788 Gm13148-201ENSMUST00000118892 745 ntBASIC18.8■□□□□ 0.6
Col6a2Q02788 Gm12918-201ENSMUST00000120234 636 ntBASIC18.8■□□□□ 0.6
Col6a2Q02788 Gm15710-201ENSMUST00000121821 636 ntBASIC18.8■□□□□ 0.6
Col6a2Q02788 Gm5075-201ENSMUST00000196916 622 ntBASIC18.8■□□□□ 0.6
Col6a2Q02788 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a2Q02788 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.8■□□□□ 0.6
Col6a2Q02788 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.8■□□□□ 0.6
Col6a2Q02788 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a2Q02788 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a2Q02788 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a2Q02788 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a2Q02788 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a2Q02788 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col6a2Q02788 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a2Q02788 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Col6a2Q02788 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Col6a2Q02788 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.79■□□□□ 0.6
Col6a2Q02788 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.79■□□□□ 0.6
Col6a2Q02788 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a2Q02788 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Col6a2Q02788 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a2Q02788 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a2Q02788 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a2Q02788 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a2Q02788 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col6a2Q02788 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms