Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Brca2P97929 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.46■□□□□ 0.55
Brca2P97929 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Brca2P97929 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Brca2P97929 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Brca2P97929 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Brca2P97929 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Brca2P97929 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Brca2P97929 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.45■□□□□ 0.54
Brca2P97929 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.45■□□□□ 0.54
Brca2P97929 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.45■□□□□ 0.54
Brca2P97929 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Brca2P97929 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Brca2P97929 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Brca2P97929 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.44■□□□□ 0.54
Brca2P97929 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Gm5867-201ENSMUST00000063197 592 ntBASIC18.44■□□□□ 0.54
Brca2P97929 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.44■□□□□ 0.54
Brca2P97929 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Brca2P97929 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.44■□□□□ 0.54
Brca2P97929 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.44■□□□□ 0.54
Brca2P97929 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Brca2P97929 Gm5417-201ENSMUST00000079706 384 ntBASIC18.44■□□□□ 0.54
Brca2P97929 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.43■□□□□ 0.54
Brca2P97929 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.43■□□□□ 0.54
Brca2P97929 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.43■□□□□ 0.54
Brca2P97929 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Brca2P97929 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Brca2P97929 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.43■□□□□ 0.54
Brca2P97929 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.42■□□□□ 0.54
Brca2P97929 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Brca2P97929 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.42■□□□□ 0.54
Brca2P97929 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Brca2P97929 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
Brca2P97929 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Brca2P97929 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.41■□□□□ 0.54
Brca2P97929 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Brca2P97929 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.41■□□□□ 0.54
Brca2P97929 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Brca2P97929 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Brca2P97929 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Brca2P97929 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Brca2P97929 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Brca2P97929 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
Brca2P97929 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Brca2P97929 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Brca2P97929 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.41■□□□□ 0.54
Brca2P97929 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Brca2P97929 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Brca2P97929 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Brca2P97929 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Brca2P97929 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Brca2P97929 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Brca2P97929 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.4■□□□□ 0.54
Brca2P97929 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Brca2P97929 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Brca2P97929 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Brca2P97929 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Brca2P97929 Gm7461-201ENSMUST00000058918 827 ntBASIC18.4■□□□□ 0.54
Brca2P97929 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Brca2P97929 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Brca2P97929 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Brca2P97929 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Brca2P97929 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca2P97929 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca2P97929 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Brca2P97929 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Brca2P97929 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca2P97929 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Brca2P97929 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Brca2P97929 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.39■□□□□ 0.53
Brca2P97929 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca2P97929 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.39■□□□□ 0.53
Brca2P97929 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Brca2P97929 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.38■□□□□ 0.53
Brca2P97929 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Brca2P97929 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.38■□□□□ 0.53
Brca2P97929 Gm18666-201ENSMUST00000190039 958 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms