Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.36■□□□□ 0.69
Trim43bP86448 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
Trim43bP86448 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43bP86448 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43bP86448 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43bP86448 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43bP86448 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim43bP86448 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43bP86448 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43bP86448 AA386476-201ENSMUST00000098781 1665 ntBASIC19.36■□□□□ 0.69
Trim43bP86448 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43bP86448 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim43bP86448 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim43bP86448 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.35■□□□□ 0.69
Trim43bP86448 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43bP86448 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43bP86448 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.35■□□□□ 0.69
Trim43bP86448 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43bP86448 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43bP86448 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43bP86448 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43bP86448 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim43bP86448 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim43bP86448 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.35■□□□□ 0.69
Trim43bP86448 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim43bP86448 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim43bP86448 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43bP86448 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43bP86448 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43bP86448 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43bP86448 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43bP86448 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43bP86448 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43bP86448 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43bP86448 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Trim43bP86448 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43bP86448 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43bP86448 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim43bP86448 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.33■□□□□ 0.69
Trim43bP86448 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43bP86448 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43bP86448 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim43bP86448 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Trim43bP86448 Gm12251-201ENSMUST00000117893 792 ntBASIC19.33■□□□□ 0.68
Trim43bP86448 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Trim43bP86448 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43bP86448 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43bP86448 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43bP86448 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43bP86448 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43bP86448 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43bP86448 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43bP86448 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43bP86448 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.33■□□□□ 0.68
Trim43bP86448 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43bP86448 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim43bP86448 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43bP86448 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43bP86448 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43bP86448 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43bP86448 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43bP86448 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim43bP86448 Gm8495-201ENSMUST00000188740 694 ntBASIC19.32■□□□□ 0.68
Trim43bP86448 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim43bP86448 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trim43bP86448 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43bP86448 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.32■□□□□ 0.68
Trim43bP86448 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim43bP86448 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43bP86448 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43bP86448 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43bP86448 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim43bP86448 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim43bP86448 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Trim43bP86448 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.31■□□□□ 0.68
Trim43bP86448 Gm18284-201ENSMUST00000172604 624 ntBASIC19.31■□□□□ 0.68
Trim43bP86448 Gm26833-201ENSMUST00000180899 440 ntBASIC19.31■□□□□ 0.68
Trim43bP86448 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.31■□□□□ 0.68
Trim43bP86448 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim43bP86448 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim43bP86448 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Trim43bP86448 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim43bP86448 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim43bP86448 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43bP86448 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim43bP86448 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms