Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Casp4P70343 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.71■□□□□ 0.75
Casp4P70343 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Casp4P70343 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Casp4P70343 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.71■□□□□ 0.75
Casp4P70343 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Gm8495-201ENSMUST00000188740 694 ntBASIC19.71■□□□□ 0.75
Casp4P70343 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.71■□□□□ 0.75
Casp4P70343 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Casp4P70343 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Casp4P70343 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Casp4P70343 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.71■□□□□ 0.75
Casp4P70343 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp4P70343 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp4P70343 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp4P70343 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp4P70343 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp4P70343 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp4P70343 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.7■□□□□ 0.74
Casp4P70343 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.7■□□□□ 0.74
Casp4P70343 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp4P70343 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.7■□□□□ 0.74
Casp4P70343 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Casp4P70343 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.7■□□□□ 0.74
Casp4P70343 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp4P70343 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.69■□□□□ 0.74
Casp4P70343 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp4P70343 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp4P70343 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Casp4P70343 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Casp4P70343 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Casp4P70343 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp4P70343 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp4P70343 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Casp4P70343 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Casp4P70343 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.69■□□□□ 0.74
Casp4P70343 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp4P70343 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp4P70343 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp4P70343 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Casp4P70343 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Casp4P70343 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Casp4P70343 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Casp4P70343 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.68■□□□□ 0.74
Casp4P70343 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.68■□□□□ 0.74
Casp4P70343 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Casp4P70343 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.68■□□□□ 0.74
Casp4P70343 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Casp4P70343 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Casp4P70343 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casp4P70343 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casp4P70343 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casp4P70343 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.67■□□□□ 0.74
Casp4P70343 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Casp4P70343 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.67■□□□□ 0.74
Casp4P70343 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Casp4P70343 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp4P70343 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp4P70343 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Casp4P70343 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.66■□□□□ 0.74
Casp4P70343 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp4P70343 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp4P70343 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp4P70343 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Casp4P70343 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp4P70343 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp4P70343 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Casp4P70343 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp4P70343 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Casp4P70343 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Casp4P70343 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Casp4P70343 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.65■□□□□ 0.74
Casp4P70343 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.65■□□□□ 0.74
Casp4P70343 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.65■□□□□ 0.74
Casp4P70343 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Casp4P70343 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms