Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pdlim4P70271 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim4P70271 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim4P70271 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.66■□□□□ 0.1
Pdlim4P70271 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Pdlim4P70271 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim4P70271 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.66■□□□□ 0.1
Pdlim4P70271 Gm18284-201ENSMUST00000172604 624 ntBASIC15.66■□□□□ 0.1
Pdlim4P70271 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.66■□□□□ 0.1
Pdlim4P70271 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.66■□□□□ 0.1
Pdlim4P70271 Gm42778-201ENSMUST00000199644 553 ntBASIC15.66■□□□□ 0.1
Pdlim4P70271 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.66■□□□□ 0.1
Pdlim4P70271 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim4P70271 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim4P70271 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim4P70271 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim4P70271 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim4P70271 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim4P70271 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim4P70271 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pdlim4P70271 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pdlim4P70271 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Pdlim4P70271 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Pdlim4P70271 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.65■□□□□ 0.1
Pdlim4P70271 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pdlim4P70271 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pdlim4P70271 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.65■□□□□ 0.1
Pdlim4P70271 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim4P70271 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim4P70271 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Pdlim4P70271 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim4P70271 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim4P70271 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.64■□□□□ 0.09
Pdlim4P70271 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim4P70271 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pdlim4P70271 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim4P70271 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pdlim4P70271 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim4P70271 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim4P70271 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.64■□□□□ 0.09
Pdlim4P70271 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.64■□□□□ 0.09
Pdlim4P70271 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.64■□□□□ 0.09
Pdlim4P70271 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pdlim4P70271 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.64■□□□□ 0.09
Pdlim4P70271 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Pdlim4P70271 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pdlim4P70271 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Pdlim4P70271 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.63■□□□□ 0.09
Pdlim4P70271 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pdlim4P70271 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Pdlim4P70271 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pdlim4P70271 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pdlim4P70271 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pdlim4P70271 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Pdlim4P70271 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pdlim4P70271 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pdlim4P70271 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
Pdlim4P70271 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim4P70271 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.62■□□□□ 0.09
Pdlim4P70271 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim4P70271 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim4P70271 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim4P70271 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim4P70271 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.62■□□□□ 0.09
Pdlim4P70271 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
Pdlim4P70271 CT030146.1-201ENSMUST00000220919 217 ntBASIC15.62■□□□□ 0.09
Pdlim4P70271 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim4P70271 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim4P70271 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim4P70271 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim4P70271 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pdlim4P70271 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms