Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six5P70178 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Six5P70178 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six5P70178 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Six5P70178 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.65■□□□□ 0.42
Six5P70178 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Six5P70178 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six5P70178 Gm13234-201ENSMUST00000120010 747 ntBASIC17.65■□□□□ 0.42
Six5P70178 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six5P70178 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Six5P70178 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six5P70178 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Six5P70178 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.65■□□□□ 0.42
Six5P70178 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.65■□□□□ 0.42
Six5P70178 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.65■□□□□ 0.42
Six5P70178 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Six5P70178 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six5P70178 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Six5P70178 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Six5P70178 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Six5P70178 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Six5P70178 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Six5P70178 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Six5P70178 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Six5P70178 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Six5P70178 Reep4-203ENSMUST00000226563 1444 ntBASIC17.64■□□□□ 0.42
Six5P70178 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Six5P70178 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Six5P70178 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.64■□□□□ 0.41
Six5P70178 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six5P70178 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.64■□□□□ 0.41
Six5P70178 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six5P70178 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.64■□□□□ 0.41
Six5P70178 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six5P70178 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Six5P70178 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six5P70178 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six5P70178 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Six5P70178 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.64■□□□□ 0.41
Six5P70178 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Six5P70178 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Six5P70178 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six5P70178 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.63■□□□□ 0.41
Six5P70178 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six5P70178 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six5P70178 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six5P70178 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six5P70178 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.63■□□□□ 0.41
Six5P70178 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.63■□□□□ 0.41
Six5P70178 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Six5P70178 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Six5P70178 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Six5P70178 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Six5P70178 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six5P70178 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six5P70178 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six5P70178 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Six5P70178 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Six5P70178 Gm18284-201ENSMUST00000172604 624 ntBASIC17.62■□□□□ 0.41
Six5P70178 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.62■□□□□ 0.41
Six5P70178 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Six5P70178 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six5P70178 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six5P70178 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Six5P70178 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Six5P70178 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Six5P70178 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Six5P70178 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
Six5P70178 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Six5P70178 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.61■□□□□ 0.41
Six5P70178 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Six5P70178 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six5P70178 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six5P70178 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Six5P70178 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six5P70178 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Six5P70178 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Six5P70178 Gm42778-201ENSMUST00000199644 553 ntBASIC17.6■□□□□ 0.41
Six5P70178 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six5P70178 Gm5874-201ENSMUST00000096101 508 ntBASIC17.6■□□□□ 0.41
Six5P70178 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six5P70178 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Six5P70178 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six5P70178 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Six5P70178 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.6■□□□□ 0.41
Six5P70178 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six5P70178 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Six5P70178 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms