Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crnkl1P63154 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.66■□□□□ 0.58
Crnkl1P63154 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crnkl1P63154 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.66■□□□□ 0.58
Crnkl1P63154 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crnkl1P63154 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crnkl1P63154 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Crnkl1P63154 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Crnkl1P63154 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crnkl1P63154 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crnkl1P63154 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Crnkl1P63154 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.65■□□□□ 0.58
Crnkl1P63154 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Crnkl1P63154 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crnkl1P63154 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crnkl1P63154 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crnkl1P63154 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crnkl1P63154 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crnkl1P63154 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Crnkl1P63154 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.64■□□□□ 0.58
Crnkl1P63154 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Crnkl1P63154 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crnkl1P63154 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crnkl1P63154 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Crnkl1P63154 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Crnkl1P63154 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Crnkl1P63154 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Crnkl1P63154 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crnkl1P63154 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Crnkl1P63154 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crnkl1P63154 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.63■□□□□ 0.57
Crnkl1P63154 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crnkl1P63154 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crnkl1P63154 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crnkl1P63154 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crnkl1P63154 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crnkl1P63154 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.63■□□□□ 0.57
Crnkl1P63154 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crnkl1P63154 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crnkl1P63154 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Crnkl1P63154 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Crnkl1P63154 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Crnkl1P63154 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Crnkl1P63154 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Crnkl1P63154 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Crnkl1P63154 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.62■□□□□ 0.57
Crnkl1P63154 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.62■□□□□ 0.57
Crnkl1P63154 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Crnkl1P63154 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Crnkl1P63154 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Crnkl1P63154 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.62■□□□□ 0.57
Crnkl1P63154 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Crnkl1P63154 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.62■□□□□ 0.57
Crnkl1P63154 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Crnkl1P63154 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
Crnkl1P63154 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Crnkl1P63154 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Crnkl1P63154 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Crnkl1P63154 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Crnkl1P63154 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Crnkl1P63154 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Crnkl1P63154 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.61■□□□□ 0.57
Crnkl1P63154 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Crnkl1P63154 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.61■□□□□ 0.57
Crnkl1P63154 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Crnkl1P63154 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.61■□□□□ 0.57
Crnkl1P63154 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Crnkl1P63154 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Crnkl1P63154 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Crnkl1P63154 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Crnkl1P63154 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Crnkl1P63154 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Crnkl1P63154 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Crnkl1P63154 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.6■□□□□ 0.57
Crnkl1P63154 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Crnkl1P63154 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Crnkl1P63154 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Crnkl1P63154 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Crnkl1P63154 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Crnkl1P63154 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Crnkl1P63154 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Crnkl1P63154 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Crnkl1P63154 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.59■□□□□ 0.57
Crnkl1P63154 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.59■□□□□ 0.57
Crnkl1P63154 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Crnkl1P63154 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Crnkl1P63154 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Crnkl1P63154 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Crnkl1P63154 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Crnkl1P63154 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
Crnkl1P63154 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Crnkl1P63154 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.59■□□□□ 0.57
Crnkl1P63154 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Crnkl1P63154 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Crnkl1P63154 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Crnkl1P63154 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Crnkl1P63154 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Crnkl1P63154 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Crnkl1P63154 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.58■□□□□ 0.57
Crnkl1P63154 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms