Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Lsm6P62313 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Lsm6P62313 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm6P62313 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm6P62313 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm6P62313 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Lsm6P62313 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm6P62313 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm6P62313 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm6P62313 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm6P62313 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Lsm6P62313 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm6P62313 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm6P62313 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Lsm6P62313 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Lsm6P62313 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.53■□□□□ 0.24
Lsm6P62313 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.53■□□□□ 0.24
Lsm6P62313 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lsm6P62313 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Lsm6P62313 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lsm6P62313 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm6P62313 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm6P62313 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm6P62313 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm6P62313 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm6P62313 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.52■□□□□ 0.23
Lsm6P62313 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lsm6P62313 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm6P62313 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm6P62313 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.51■□□□□ 0.23
Lsm6P62313 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lsm6P62313 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm6P62313 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lsm6P62313 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
Lsm6P62313 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.51■□□□□ 0.23
Lsm6P62313 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm6P62313 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm6P62313 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lsm6P62313 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Lsm6P62313 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Lsm6P62313 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lsm6P62313 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Lsm6P62313 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.5■□□□□ 0.23
Lsm6P62313 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.5■□□□□ 0.23
Lsm6P62313 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Lsm6P62313 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lsm6P62313 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lsm6P62313 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.49■□□□□ 0.23
Lsm6P62313 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Lsm6P62313 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Lsm6P62313 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Lsm6P62313 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.49■□□□□ 0.23
Lsm6P62313 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm6P62313 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Lsm6P62313 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm6P62313 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.49■□□□□ 0.23
Lsm6P62313 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm6P62313 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Lsm6P62313 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm6P62313 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm6P62313 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lsm6P62313 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.49■□□□□ 0.23
Lsm6P62313 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms