Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
Sec61a1P61620 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Sec61a1P61620 Gm8493-201ENSMUST00000196881 489 ntBASIC16.57■□□□□ 0.24
Sec61a1P61620 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
Sec61a1P61620 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sec61a1P61620 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.57■□□□□ 0.24
Sec61a1P61620 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sec61a1P61620 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.56■□□□□ 0.24
Sec61a1P61620 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sec61a1P61620 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.56■□□□□ 0.24
Sec61a1P61620 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Sec61a1P61620 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.56■□□□□ 0.24
Sec61a1P61620 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.56■□□□□ 0.24
Sec61a1P61620 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Sec61a1P61620 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Sec61a1P61620 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Sec61a1P61620 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sec61a1P61620 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.55■□□□□ 0.24
Sec61a1P61620 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Sec61a1P61620 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Sec61a1P61620 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.55■□□□□ 0.24
Sec61a1P61620 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Sec61a1P61620 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Sec61a1P61620 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.55■□□□□ 0.24
Sec61a1P61620 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Sec61a1P61620 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Sec61a1P61620 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.55■□□□□ 0.24
Sec61a1P61620 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.54■□□□□ 0.24
Sec61a1P61620 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.54■□□□□ 0.24
Sec61a1P61620 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a1P61620 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a1P61620 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.54■□□□□ 0.24
Sec61a1P61620 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a1P61620 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a1P61620 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sec61a1P61620 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a1P61620 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Sec61a1P61620 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a1P61620 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.54■□□□□ 0.24
Sec61a1P61620 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a1P61620 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.54■□□□□ 0.24
Sec61a1P61620 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a1P61620 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a1P61620 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Sec61a1P61620 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Sec61a1P61620 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Sec61a1P61620 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Mir6236-201ENSMUST00000184437 123 ntBASIC16.53■□□□□ 0.24
Sec61a1P61620 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.53■□□□□ 0.24
Sec61a1P61620 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sec61a1P61620 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sec61a1P61620 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a1P61620 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a1P61620 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Sec61a1P61620 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a1P61620 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a1P61620 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a1P61620 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a1P61620 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sec61a1P61620 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms