Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CtskP55097 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CtskP55097 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CtskP55097 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CtskP55097 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CtskP55097 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CtskP55097 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CtskP55097 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CtskP55097 Gm7290-201ENSMUST00000104990 617 ntBASIC18.48■□□□□ 0.55
CtskP55097 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.48■□□□□ 0.55
CtskP55097 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CtskP55097 Gm12918-201ENSMUST00000120234 636 ntBASIC18.48■□□□□ 0.55
CtskP55097 Gm15710-201ENSMUST00000121821 636 ntBASIC18.48■□□□□ 0.55
CtskP55097 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.48■□□□□ 0.55
CtskP55097 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.48■□□□□ 0.55
CtskP55097 Gm5075-201ENSMUST00000196916 622 ntBASIC18.48■□□□□ 0.55
CtskP55097 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CtskP55097 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CtskP55097 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.48■□□□□ 0.55
CtskP55097 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.48■□□□□ 0.55
CtskP55097 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CtskP55097 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.48■□□□□ 0.55
CtskP55097 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CtskP55097 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CtskP55097 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CtskP55097 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CtskP55097 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.47■□□□□ 0.55
CtskP55097 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CtskP55097 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CtskP55097 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CtskP55097 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.47■□□□□ 0.55
CtskP55097 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CtskP55097 Gm13148-201ENSMUST00000118892 745 ntBASIC18.47■□□□□ 0.55
CtskP55097 Gm13534-201ENSMUST00000121169 513 ntBASIC18.47■□□□□ 0.55
CtskP55097 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CtskP55097 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.47■□□□□ 0.55
CtskP55097 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CtskP55097 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CtskP55097 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CtskP55097 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CtskP55097 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.47■□□□□ 0.55
CtskP55097 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtskP55097 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
CtskP55097 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtskP55097 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtskP55097 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CtskP55097 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtskP55097 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtskP55097 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtskP55097 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CtskP55097 Gm10653-202ENSMUST00000139570 835 ntBASIC18.46■□□□□ 0.55
CtskP55097 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.46■□□□□ 0.55
CtskP55097 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.46■□□□□ 0.55
CtskP55097 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtskP55097 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.46■□□□□ 0.55
CtskP55097 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CtskP55097 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtskP55097 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.46■□□□□ 0.55
CtskP55097 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CtskP55097 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtskP55097 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtskP55097 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.46■□□□□ 0.55
CtskP55097 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.46■□□□□ 0.55
CtskP55097 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CtskP55097 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.45■□□□□ 0.54
CtskP55097 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CtskP55097 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CtskP55097 Nespas-201ENSMUST00000143738 1083 ntBASIC18.45■□□□□ 0.54
CtskP55097 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CtskP55097 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.45■□□□□ 0.54
CtskP55097 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.45■□□□□ 0.54
CtskP55097 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CtskP55097 Gm6365-201ENSMUST00000054711 744 ntBASIC18.45■□□□□ 0.54
CtskP55097 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CtskP55097 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.45■□□□□ 0.54
CtskP55097 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CtskP55097 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CtskP55097 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CtskP55097 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.45■□□□□ 0.54
CtskP55097 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CtskP55097 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CtskP55097 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.44■□□□□ 0.54
CtskP55097 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CtskP55097 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.44■□□□□ 0.54
CtskP55097 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CtskP55097 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CtskP55097 Gm6420-201ENSMUST00000193885 723 ntBASIC18.44■□□□□ 0.54
CtskP55097 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.44■□□□□ 0.54
CtskP55097 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CtskP55097 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CtskP55097 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CtskP55097 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CtskP55097 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.43■□□□□ 0.54
CtskP55097 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CtskP55097 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CtskP55097 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CtskP55097 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.43■□□□□ 0.54
CtskP55097 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CtskP55097 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CtskP55097 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms