Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Hmgcs2P54869 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgcs2P54869 Gm11249-201ENSMUST00000117071 859 ntBASIC21.13■□□□□ 0.97
Hmgcs2P54869 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Hmgcs2P54869 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgcs2P54869 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgcs2P54869 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgcs2P54869 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgcs2P54869 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgcs2P54869 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgcs2P54869 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgcs2P54869 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcs2P54869 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcs2P54869 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.12■□□□□ 0.97
Hmgcs2P54869 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcs2P54869 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcs2P54869 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.12■□□□□ 0.97
Hmgcs2P54869 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.12■□□□□ 0.97
Hmgcs2P54869 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcs2P54869 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcs2P54869 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcs2P54869 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgcs2P54869 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcs2P54869 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcs2P54869 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcs2P54869 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcs2P54869 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcs2P54869 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcs2P54869 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcs2P54869 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.11■□□□□ 0.97
Hmgcs2P54869 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.11■□□□□ 0.97
Hmgcs2P54869 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.11■□□□□ 0.97
Hmgcs2P54869 Gm19094-201ENSMUST00000209791 1246 ntBASIC21.11■□□□□ 0.97
Hmgcs2P54869 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.11■□□□□ 0.97
Hmgcs2P54869 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcs2P54869 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcs2P54869 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgcs2P54869 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Hmgcs2P54869 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Hmgcs2P54869 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgcs2P54869 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Hmgcs2P54869 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Hmgcs2P54869 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.1■□□□□ 0.97
Hmgcs2P54869 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgcs2P54869 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Hmgcs2P54869 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Hmgcs2P54869 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgcs2P54869 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.09■□□□□ 0.97
Hmgcs2P54869 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.09■□□□□ 0.97
Hmgcs2P54869 Gm6576-201ENSMUST00000169678 883 ntBASIC21.09■□□□□ 0.97
Hmgcs2P54869 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Hmgcs2P54869 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcs2P54869 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcs2P54869 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcs2P54869 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcs2P54869 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcs2P54869 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcs2P54869 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgcs2P54869 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgcs2P54869 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.08■□□□□ 0.97
Hmgcs2P54869 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgcs2P54869 Gm2399-201ENSMUST00000104944 225 ntBASIC21.08■□□□□ 0.97
Hmgcs2P54869 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgcs2P54869 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgcs2P54869 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgcs2P54869 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgcs2P54869 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC21.08■□□□□ 0.97
Hmgcs2P54869 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.08■□□□□ 0.97
Hmgcs2P54869 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hmgcs2P54869 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hmgcs2P54869 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Hmgcs2P54869 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcs2P54869 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcs2P54869 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcs2P54869 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.07■□□□□ 0.96
Hmgcs2P54869 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcs2P54869 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.07■□□□□ 0.96
Hmgcs2P54869 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.07■□□□□ 0.96
Hmgcs2P54869 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcs2P54869 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hmgcs2P54869 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.07■□□□□ 0.96
Hmgcs2P54869 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcs2P54869 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcs2P54869 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcs2P54869 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcs2P54869 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.06■□□□□ 0.96
Hmgcs2P54869 Gm22325-201ENSMUST00000158904 308 ntBASIC21.06■□□□□ 0.96
Hmgcs2P54869 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcs2P54869 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.06■□□□□ 0.96
Hmgcs2P54869 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcs2P54869 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcs2P54869 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hmgcs2P54869 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms