Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.15■□□□□ 0.82
NrlP54846 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NrlP54846 Gm26524-201ENSMUST00000192339 390 ntBASIC20.15■□□□□ 0.82
NrlP54846 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.15■□□□□ 0.82
NrlP54846 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.15■□□□□ 0.82
NrlP54846 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NrlP54846 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NrlP54846 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NrlP54846 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NrlP54846 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
NrlP54846 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.82
NrlP54846 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NrlP54846 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.14■□□□□ 0.81
NrlP54846 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.14■□□□□ 0.81
NrlP54846 Trmt13-210ENSMUST00000198454 880 ntBASIC20.14■□□□□ 0.81
NrlP54846 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NrlP54846 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NrlP54846 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.14■□□□□ 0.81
NrlP54846 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NrlP54846 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NrlP54846 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NrlP54846 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.13■□□□□ 0.81
NrlP54846 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.13■□□□□ 0.81
NrlP54846 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
NrlP54846 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
NrlP54846 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NrlP54846 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.13■□□□□ 0.81
NrlP54846 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NrlP54846 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NrlP54846 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.13■□□□□ 0.81
NrlP54846 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
NrlP54846 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
NrlP54846 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
NrlP54846 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NrlP54846 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NrlP54846 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.12■□□□□ 0.81
NrlP54846 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NrlP54846 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.12■□□□□ 0.81
NrlP54846 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NrlP54846 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.12■□□□□ 0.81
NrlP54846 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NrlP54846 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.12■□□□□ 0.81
NrlP54846 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.12■□□□□ 0.81
NrlP54846 Rab3c-203ENSMUST00000224180 967 ntBASIC20.12■□□□□ 0.81
NrlP54846 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
NrlP54846 Gm10812-201ENSMUST00000099864 546 ntBASIC20.12■□□□□ 0.81
NrlP54846 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NrlP54846 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NrlP54846 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NrlP54846 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NrlP54846 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NrlP54846 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NrlP54846 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NrlP54846 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NrlP54846 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NrlP54846 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NrlP54846 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NrlP54846 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.11■□□□□ 0.81
NrlP54846 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NrlP54846 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NrlP54846 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NrlP54846 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NrlP54846 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NrlP54846 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NrlP54846 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NrlP54846 Golph3-202ENSMUST00000226517 2359 ntBASIC20.1■□□□□ 0.81
NrlP54846 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NrlP54846 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.1■□□□□ 0.81
NrlP54846 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.1■□□□□ 0.81
NrlP54846 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
NrlP54846 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NrlP54846 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NrlP54846 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NrlP54846 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NrlP54846 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NrlP54846 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NrlP54846 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NrlP54846 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NrlP54846 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NrlP54846 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NrlP54846 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NrlP54846 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NrlP54846 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.09■□□□□ 0.81
NrlP54846 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
NrlP54846 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.08■□□□□ 0.81
NrlP54846 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NrlP54846 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NrlP54846 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NrlP54846 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NrlP54846 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NrlP54846 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NrlP54846 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NrlP54846 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NrlP54846 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
NrlP54846 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NrlP54846 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NrlP54846 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NrlP54846 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
NrlP54846 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NrlP54846 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms