Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Limk1P53668 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Limk1P53668 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Limk1P53668 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Limk1P53668 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Limk1P53668 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Limk1P53668 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Limk1P53668 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Limk1P53668 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Limk1P53668 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Limk1P53668 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Limk1P53668 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.49■□□□□ 0.55
Limk1P53668 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.49■□□□□ 0.55
Limk1P53668 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Limk1P53668 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Limk1P53668 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Limk1P53668 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.49■□□□□ 0.55
Limk1P53668 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Limk1P53668 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Limk1P53668 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Limk1P53668 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Limk1P53668 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Limk1P53668 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.48■□□□□ 0.55
Limk1P53668 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Limk1P53668 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
Limk1P53668 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Limk1P53668 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.48■□□□□ 0.55
Limk1P53668 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Limk1P53668 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.48■□□□□ 0.55
Limk1P53668 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.48■□□□□ 0.55
Limk1P53668 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Limk1P53668 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Limk1P53668 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Limk1P53668 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Limk1P53668 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Limk1P53668 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Limk1P53668 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.47■□□□□ 0.55
Limk1P53668 Gm2559-201ENSMUST00000201323 363 ntBASIC18.47■□□□□ 0.55
Limk1P53668 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Limk1P53668 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Limk1P53668 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Limk1P53668 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Limk1P53668 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Limk1P53668 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Limk1P53668 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Limk1P53668 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Limk1P53668 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Limk1P53668 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Limk1P53668 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.46■□□□□ 0.55
Limk1P53668 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Limk1P53668 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Limk1P53668 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Limk1P53668 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Limk1P53668 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Limk1P53668 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Limk1P53668 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Limk1P53668 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Limk1P53668 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Limk1P53668 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Limk1P53668 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Limk1P53668 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Limk1P53668 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Limk1P53668 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.45■□□□□ 0.54
Limk1P53668 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Limk1P53668 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Limk1P53668 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Limk1P53668 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Limk1P53668 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.44■□□□□ 0.54
Limk1P53668 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Limk1P53668 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Limk1P53668 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Limk1P53668 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Limk1P53668 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Limk1P53668 Gm37055-201ENSMUST00000191866 133 ntBASIC18.44■□□□□ 0.54
Limk1P53668 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Limk1P53668 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Limk1P53668 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Limk1P53668 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Limk1P53668 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Limk1P53668 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Limk1P53668 Gm18666-201ENSMUST00000190039 958 ntBASIC18.43■□□□□ 0.54
Limk1P53668 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Limk1P53668 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Limk1P53668 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.43■□□□□ 0.54
Limk1P53668 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.43■□□□□ 0.54
Limk1P53668 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Limk1P53668 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Limk1P53668 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Limk1P53668 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Limk1P53668 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Limk1P53668 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Limk1P53668 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Limk1P53668 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Limk1P53668 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Limk1P53668 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Limk1P53668 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.42■□□□□ 0.54
Limk1P53668 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Limk1P53668 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Limk1P53668 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Limk1P53668 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms