Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.33■□□□□ 0.53
Lbx1P52955 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Lbx1P52955 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lbx1P52955 Gm28033-201ENSMUST00000184224 96 ntBASIC18.33■□□□□ 0.52
Lbx1P52955 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lbx1P52955 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lbx1P52955 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Lbx1P52955 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lbx1P52955 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lbx1P52955 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lbx1P52955 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lbx1P52955 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lbx1P52955 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lbx1P52955 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Lbx1P52955 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Lbx1P52955 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Lbx1P52955 Gm18032-201ENSMUST00000222541 538 ntBASIC18.32■□□□□ 0.52
Lbx1P52955 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.32■□□□□ 0.52
Lbx1P52955 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lbx1P52955 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lbx1P52955 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lbx1P52955 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lbx1P52955 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.31■□□□□ 0.52
Lbx1P52955 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.31■□□□□ 0.52
Lbx1P52955 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lbx1P52955 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lbx1P52955 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lbx1P52955 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.31■□□□□ 0.52
Lbx1P52955 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lbx1P52955 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Lbx1P52955 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lbx1P52955 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lbx1P52955 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lbx1P52955 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Lbx1P52955 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lbx1P52955 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lbx1P52955 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lbx1P52955 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lbx1P52955 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lbx1P52955 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.3■□□□□ 0.52
Lbx1P52955 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lbx1P52955 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lbx1P52955 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lbx1P52955 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lbx1P52955 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lbx1P52955 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lbx1P52955 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.29■□□□□ 0.52
Lbx1P52955 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lbx1P52955 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lbx1P52955 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lbx1P52955 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.29■□□□□ 0.52
Lbx1P52955 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lbx1P52955 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lbx1P52955 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Lbx1P52955 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lbx1P52955 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lbx1P52955 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lbx1P52955 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lbx1P52955 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Lbx1P52955 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lbx1P52955 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.28■□□□□ 0.52
Lbx1P52955 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Lbx1P52955 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lbx1P52955 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lbx1P52955 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Lbx1P52955 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Lbx1P52955 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.27■□□□□ 0.52
Lbx1P52955 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.27■□□□□ 0.52
Lbx1P52955 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.27■□□□□ 0.52
Lbx1P52955 Gm17661-201ENSMUST00000170317 270 ntBASIC18.27■□□□□ 0.52
Lbx1P52955 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Lbx1P52955 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lbx1P52955 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lbx1P52955 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lbx1P52955 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lbx1P52955 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Lbx1P52955 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.26■□□□□ 0.51
Lbx1P52955 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lbx1P52955 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lbx1P52955 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lbx1P52955 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lbx1P52955 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.26■□□□□ 0.51
Lbx1P52955 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Lbx1P52955 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lbx1P52955 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.26■□□□□ 0.51
Lbx1P52955 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lbx1P52955 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Lbx1P52955 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Lbx1P52955 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms