Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.02■□□□□ 0.32
Rfx3P48381 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.02■□□□□ 0.32
Rfx3P48381 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rfx3P48381 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rfx3P48381 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx3P48381 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx3P48381 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx3P48381 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.01■□□□□ 0.31
Rfx3P48381 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.01■□□□□ 0.31
Rfx3P48381 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.01■□□□□ 0.31
Rfx3P48381 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx3P48381 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx3P48381 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.01■□□□□ 0.31
Rfx3P48381 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rfx3P48381 Rarb-207ENSMUST00000225921 2756 ntBASIC17■□□□□ 0.31
Rfx3P48381 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17■□□□□ 0.31
Rfx3P48381 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Mir7075-201ENSMUST00000184187 82 ntBASIC17■□□□□ 0.31
Rfx3P48381 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rfx3P48381 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rfx3P48381 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rfx3P48381 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx3P48381 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx3P48381 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx3P48381 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Rfx3P48381 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx3P48381 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx3P48381 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx3P48381 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx3P48381 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx3P48381 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx3P48381 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx3P48381 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rfx3P48381 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx3P48381 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx3P48381 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx3P48381 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx3P48381 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx3P48381 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx3P48381 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.98■□□□□ 0.31
Rfx3P48381 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.98■□□□□ 0.31
Rfx3P48381 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx3P48381 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.98■□□□□ 0.31
Rfx3P48381 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx3P48381 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.98■□□□□ 0.31
Rfx3P48381 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx3P48381 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx3P48381 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx3P48381 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 Gm12251-201ENSMUST00000117893 792 ntBASIC16.97■□□□□ 0.31
Rfx3P48381 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Rfx3P48381 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.97■□□□□ 0.31
Rfx3P48381 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rfx3P48381 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx3P48381 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Rfx3P48381 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.96■□□□□ 0.31
Rfx3P48381 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.96■□□□□ 0.31
Rfx3P48381 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Rfx3P48381 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx3P48381 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms