Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HttP42859 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HttP42859 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HttP42859 Gm7461-201ENSMUST00000058918 827 ntBASIC20.53■□□□□ 0.88
HttP42859 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HttP42859 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HttP42859 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HttP42859 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HttP42859 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HttP42859 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HttP42859 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HttP42859 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HttP42859 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HttP42859 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HttP42859 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HttP42859 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.53■□□□□ 0.88
HttP42859 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.53■□□□□ 0.88
HttP42859 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HttP42859 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.53■□□□□ 0.88
HttP42859 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.53■□□□□ 0.88
HttP42859 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.53■□□□□ 0.88
HttP42859 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HttP42859 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HttP42859 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.52■□□□□ 0.88
HttP42859 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HttP42859 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HttP42859 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HttP42859 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HttP42859 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HttP42859 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HttP42859 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HttP42859 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HttP42859 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HttP42859 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HttP42859 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HttP42859 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HttP42859 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.51■□□□□ 0.87
HttP42859 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HttP42859 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HttP42859 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.51■□□□□ 0.87
HttP42859 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HttP42859 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HttP42859 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HttP42859 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HttP42859 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HttP42859 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HttP42859 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HttP42859 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HttP42859 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HttP42859 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HttP42859 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HttP42859 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HttP42859 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HttP42859 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HttP42859 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HttP42859 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HttP42859 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HttP42859 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
HttP42859 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HttP42859 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.49■□□□□ 0.87
HttP42859 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HttP42859 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HttP42859 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.49■□□□□ 0.87
HttP42859 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HttP42859 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.49■□□□□ 0.87
HttP42859 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HttP42859 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HttP42859 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HttP42859 Gm44771-201ENSMUST00000206975 626 ntBASIC20.48■□□□□ 0.87
HttP42859 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HttP42859 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HttP42859 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HttP42859 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HttP42859 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HttP42859 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HttP42859 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HttP42859 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HttP42859 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HttP42859 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HttP42859 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HttP42859 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.47■□□□□ 0.87
HttP42859 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HttP42859 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HttP42859 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.47■□□□□ 0.87
HttP42859 AA414768-201ENSMUST00000121924 1257 ntBASIC20.47■□□□□ 0.87
HttP42859 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.47■□□□□ 0.87
HttP42859 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.47■□□□□ 0.87
HttP42859 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HttP42859 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HttP42859 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HttP42859 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HttP42859 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.46■□□□□ 0.87
HttP42859 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.46■□□□□ 0.87
HttP42859 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HttP42859 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HttP42859 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HttP42859 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HttP42859 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
HttP42859 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HttP42859 Gm3375-201ENSMUST00000203929 796 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms