Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-2P42586 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Nkx2-2P42586 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.36■□□□□ 0.37
Nkx2-2P42586 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.36■□□□□ 0.37
Nkx2-2P42586 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.36■□□□□ 0.37
Nkx2-2P42586 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-2P42586 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-2P42586 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.35■□□□□ 0.37
Nkx2-2P42586 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.35■□□□□ 0.37
Nkx2-2P42586 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-2P42586 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-2P42586 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
Nkx2-2P42586 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.34■□□□□ 0.37
Nkx2-2P42586 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx2-2P42586 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-2P42586 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-2P42586 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-2P42586 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-2P42586 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-2P42586 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-2P42586 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Nkx2-2P42586 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-2P42586 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-2P42586 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-2P42586 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-2P42586 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-2P42586 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-2P42586 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-2P42586 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.33■□□□□ 0.36
Nkx2-2P42586 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Nkx2-2P42586 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-2P42586 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nkx2-2P42586 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-2P42586 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Nkx2-2P42586 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-2P42586 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-2P42586 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-2P42586 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nkx2-2P42586 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.32■□□□□ 0.36
Nkx2-2P42586 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-2P42586 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Gm42778-201ENSMUST00000199644 553 ntBASIC17.32■□□□□ 0.36
Nkx2-2P42586 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.32■□□□□ 0.36
Nkx2-2P42586 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nkx2-2P42586 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Gm13534-201ENSMUST00000121169 513 ntBASIC17.31■□□□□ 0.36
Nkx2-2P42586 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nkx2-2P42586 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms