Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cxcl12P40224 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cxcl12P40224 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Cxcl12P40224 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cxcl12P40224 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cxcl12P40224 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Cxcl12P40224 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cxcl12P40224 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.6■□□□□ 0.73
Cxcl12P40224 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cxcl12P40224 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cxcl12P40224 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cxcl12P40224 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cxcl12P40224 Gm7367-201ENSMUST00000057611 492 ntBASIC19.6■□□□□ 0.73
Cxcl12P40224 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cxcl12P40224 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.6■□□□□ 0.73
Cxcl12P40224 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cxcl12P40224 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.59■□□□□ 0.73
Cxcl12P40224 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cxcl12P40224 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cxcl12P40224 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cxcl12P40224 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.59■□□□□ 0.73
Cxcl12P40224 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cxcl12P40224 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cxcl12P40224 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
Cxcl12P40224 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.58■□□□□ 0.73
Cxcl12P40224 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cxcl12P40224 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cxcl12P40224 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cxcl12P40224 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cxcl12P40224 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cxcl12P40224 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cxcl12P40224 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Cxcl12P40224 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Cxcl12P40224 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cxcl12P40224 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cxcl12P40224 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cxcl12P40224 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cxcl12P40224 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cxcl12P40224 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cxcl12P40224 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cxcl12P40224 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cxcl12P40224 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cxcl12P40224 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cxcl12P40224 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Cxcl12P40224 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cxcl12P40224 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cxcl12P40224 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Cxcl12P40224 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.56■□□□□ 0.72
Cxcl12P40224 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.56■□□□□ 0.72
Cxcl12P40224 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cxcl12P40224 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.56■□□□□ 0.72
Cxcl12P40224 Flg-201ENSMUST00000050758 1488 ntBASIC19.55■□□□□ 0.72
Cxcl12P40224 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cxcl12P40224 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cxcl12P40224 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cxcl12P40224 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.55■□□□□ 0.72
Cxcl12P40224 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cxcl12P40224 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.55■□□□□ 0.72
Cxcl12P40224 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.55■□□□□ 0.72
Cxcl12P40224 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.55■□□□□ 0.72
Cxcl12P40224 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cxcl12P40224 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cxcl12P40224 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cxcl12P40224 Gm30025-201ENSMUST00000218555 728 ntBASIC19.55■□□□□ 0.72
Cxcl12P40224 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.55■□□□□ 0.72
Cxcl12P40224 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cxcl12P40224 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cxcl12P40224 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Cxcl12P40224 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cxcl12P40224 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cxcl12P40224 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Cxcl12P40224 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.54■□□□□ 0.72
Cxcl12P40224 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.54■□□□□ 0.72
Cxcl12P40224 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.54■□□□□ 0.72
Cxcl12P40224 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cxcl12P40224 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cxcl12P40224 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cxcl12P40224 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cxcl12P40224 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cxcl12P40224 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cxcl12P40224 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cxcl12P40224 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cxcl12P40224 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cxcl12P40224 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.53■□□□□ 0.72
Cxcl12P40224 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cxcl12P40224 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cxcl12P40224 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cxcl12P40224 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cxcl12P40224 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms