Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Cdkn1aP39689 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cdkn1aP39689 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkn1aP39689 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkn1aP39689 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cdkn1aP39689 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.58■□□□□ 0.08
Cdkn1aP39689 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.58■□□□□ 0.08
Cdkn1aP39689 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Cdkn1aP39689 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.58■□□□□ 0.08
Cdkn1aP39689 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cdkn1aP39689 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Gm13148-201ENSMUST00000118892 745 ntBASIC15.57■□□□□ 0.08
Cdkn1aP39689 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.57■□□□□ 0.08
Cdkn1aP39689 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cdkn1aP39689 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn1aP39689 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn1aP39689 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn1aP39689 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn1aP39689 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
Cdkn1aP39689 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.56■□□□□ 0.08
Cdkn1aP39689 Gm5408-201ENSMUST00000197998 747 ntBASIC15.56■□□□□ 0.08
Cdkn1aP39689 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cdkn1aP39689 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Cdkn1aP39689 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn1aP39689 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn1aP39689 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn1aP39689 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cdkn1aP39689 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Gm6211-202ENSMUST00000167849 925 ntBASIC15.55■□□□□ 0.08
Cdkn1aP39689 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.55■□□□□ 0.08
Cdkn1aP39689 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.55■□□□□ 0.08
Cdkn1aP39689 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cdkn1aP39689 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Gm27011-201ENSMUST00000182352 972 ntBASIC15.54■□□□□ 0.08
Cdkn1aP39689 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cdkn1aP39689 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.53■□□□□ 0.08
Cdkn1aP39689 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cdkn1aP39689 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms