Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thbs1P35441 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thbs1P35441 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thbs1P35441 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thbs1P35441 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.45■□□□□ 0.38
Thbs1P35441 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Thbs1P35441 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Thbs1P35441 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thbs1P35441 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.45■□□□□ 0.38
Thbs1P35441 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thbs1P35441 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thbs1P35441 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Thbs1P35441 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thbs1P35441 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thbs1P35441 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Thbs1P35441 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thbs1P35441 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thbs1P35441 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.44■□□□□ 0.38
Thbs1P35441 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thbs1P35441 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thbs1P35441 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.44■□□□□ 0.38
Thbs1P35441 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thbs1P35441 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Thbs1P35441 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thbs1P35441 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thbs1P35441 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Thbs1P35441 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Thbs1P35441 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Thbs1P35441 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Thbs1P35441 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Thbs1P35441 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.43■□□□□ 0.38
Thbs1P35441 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.43■□□□□ 0.38
Thbs1P35441 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.43■□□□□ 0.38
Thbs1P35441 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.43■□□□□ 0.38
Thbs1P35441 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Thbs1P35441 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.43■□□□□ 0.38
Thbs1P35441 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.43■□□□□ 0.38
Thbs1P35441 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Thbs1P35441 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Thbs1P35441 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.43■□□□□ 0.38
Thbs1P35441 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Thbs1P35441 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thbs1P35441 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Thbs1P35441 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Thbs1P35441 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thbs1P35441 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.42■□□□□ 0.38
Thbs1P35441 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thbs1P35441 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Thbs1P35441 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Thbs1P35441 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Thbs1P35441 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Thbs1P35441 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thbs1P35441 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Thbs1P35441 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thbs1P35441 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thbs1P35441 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Thbs1P35441 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.41■□□□□ 0.38
Thbs1P35441 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.41■□□□□ 0.38
Thbs1P35441 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.41■□□□□ 0.38
Thbs1P35441 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.41■□□□□ 0.38
Thbs1P35441 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Thbs1P35441 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Thbs1P35441 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.4■□□□□ 0.38
Thbs1P35441 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.4■□□□□ 0.38
Thbs1P35441 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Gm43060-201ENSMUST00000200621 289 ntBASIC17.4■□□□□ 0.38
Thbs1P35441 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.4■□□□□ 0.38
Thbs1P35441 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Thbs1P35441 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms