Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp13P33435 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp13P33435 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.31■□□□□ 0.68
Mmp13P33435 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Mmp13P33435 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp13P33435 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp13P33435 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.31■□□□□ 0.68
Mmp13P33435 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Mmp13P33435 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp13P33435 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp13P33435 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp13P33435 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp13P33435 Gm26833-201ENSMUST00000180899 440 ntBASIC19.3■□□□□ 0.68
Mmp13P33435 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp13P33435 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Mmp13P33435 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Mmp13P33435 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Mmp13P33435 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp13P33435 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp13P33435 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Mmp13P33435 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp13P33435 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp13P33435 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp13P33435 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp13P33435 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp13P33435 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp13P33435 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp13P33435 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Mmp13P33435 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Mmp13P33435 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp13P33435 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp13P33435 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp13P33435 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp13P33435 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Mmp13P33435 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Mmp13P33435 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp13P33435 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp13P33435 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.28■□□□□ 0.68
Mmp13P33435 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mmp13P33435 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp13P33435 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Mmp13P33435 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp13P33435 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Mmp13P33435 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp13P33435 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mmp13P33435 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mmp13P33435 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Mmp13P33435 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp13P33435 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp13P33435 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp13P33435 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp13P33435 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp13P33435 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp13P33435 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp13P33435 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp13P33435 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp13P33435 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mmp13P33435 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp13P33435 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp13P33435 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Mmp13P33435 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.25■□□□□ 0.67
Mmp13P33435 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
Mmp13P33435 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp13P33435 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Mmp13P33435 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp13P33435 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp13P33435 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mmp13P33435 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.24■□□□□ 0.67
Mmp13P33435 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.24■□□□□ 0.67
Mmp13P33435 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Mmp13P33435 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp13P33435 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.24■□□□□ 0.67
Mmp13P33435 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp13P33435 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.24■□□□□ 0.67
Mmp13P33435 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp13P33435 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Mmp13P33435 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp13P33435 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp13P33435 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp13P33435 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mmp13P33435 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.23■□□□□ 0.67
Mmp13P33435 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.23■□□□□ 0.67
Mmp13P33435 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp13P33435 Smad6-203ENSMUST00000179458 273 ntBASIC19.23■□□□□ 0.67
Mmp13P33435 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.23■□□□□ 0.67
Mmp13P33435 Gm40848-201ENSMUST00000221998 324 ntBASIC19.23■□□□□ 0.67
Mmp13P33435 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp13P33435 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Mmp13P33435 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp13P33435 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp13P33435 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp13P33435 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp13P33435 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Mmp13P33435 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp13P33435 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp13P33435 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.22■□□□□ 0.67
Mmp13P33435 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp13P33435 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp13P33435 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Mmp13P33435 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms