Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Slc6a11P31650 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Slc6a11P31650 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Slc6a11P31650 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.89■□□□□ 0.45
Slc6a11P31650 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Slc6a11P31650 Gm26833-201ENSMUST00000180899 440 ntBASIC17.89■□□□□ 0.45
Slc6a11P31650 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a11P31650 Gm10493-201ENSMUST00000097270 612 ntBASIC17.89■□□□□ 0.45
Slc6a11P31650 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Slc6a11P31650 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a11P31650 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.89■□□□□ 0.45
Slc6a11P31650 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a11P31650 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Slc6a11P31650 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a11P31650 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a11P31650 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a11P31650 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a11P31650 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.88■□□□□ 0.45
Slc6a11P31650 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc6a11P31650 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.88■□□□□ 0.45
Slc6a11P31650 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a11P31650 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.88■□□□□ 0.45
Slc6a11P31650 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Slc6a11P31650 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a11P31650 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a11P31650 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Slc6a11P31650 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a11P31650 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Slc6a11P31650 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a11P31650 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.87■□□□□ 0.45
Slc6a11P31650 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.87■□□□□ 0.45
Slc6a11P31650 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a11P31650 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Slc6a11P31650 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a11P31650 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Slc6a11P31650 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a11P31650 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a11P31650 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a11P31650 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Slc6a11P31650 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a11P31650 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Slc6a11P31650 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.87■□□□□ 0.45
Slc6a11P31650 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a11P31650 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a11P31650 Gm43060-201ENSMUST00000200621 289 ntBASIC17.86■□□□□ 0.45
Slc6a11P31650 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Slc6a11P31650 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.86■□□□□ 0.45
Slc6a11P31650 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a11P31650 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a11P31650 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a11P31650 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a11P31650 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a11P31650 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a11P31650 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a11P31650 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.86■□□□□ 0.45
Slc6a11P31650 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a11P31650 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Slc6a11P31650 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Slc6a11P31650 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Slc6a11P31650 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a11P31650 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a11P31650 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a11P31650 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a11P31650 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a11P31650 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a11P31650 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.85■□□□□ 0.45
Slc6a11P31650 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.85■□□□□ 0.45
Slc6a11P31650 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a11P31650 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a11P31650 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a11P31650 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a11P31650 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Slc6a11P31650 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a11P31650 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a11P31650 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Slc6a11P31650 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a11P31650 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a11P31650 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a11P31650 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a11P31650 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a11P31650 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Slc6a11P31650 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a11P31650 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a11P31650 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Slc6a11P31650 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a11P31650 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a11P31650 Gm12251-201ENSMUST00000117893 792 ntBASIC17.83■□□□□ 0.44
Slc6a11P31650 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a11P31650 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.83■□□□□ 0.44
Slc6a11P31650 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Slc6a11P31650 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
Slc6a11P31650 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.83■□□□□ 0.44
Slc6a11P31650 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.83■□□□□ 0.44
Slc6a11P31650 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.83■□□□□ 0.44
Slc6a11P31650 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.83■□□□□ 0.44
Slc6a11P31650 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a11P31650 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
Slc6a11P31650 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a11P31650 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc6a11P31650 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms