Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
Clk1P22518 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk1P22518 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Clk1P22518 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Clk1P22518 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Clk1P22518 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clk1P22518 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clk1P22518 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clk1P22518 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk1P22518 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.45■□□□□ 0.38
Clk1P22518 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.45■□□□□ 0.38
Clk1P22518 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.45■□□□□ 0.38
Clk1P22518 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk1P22518 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk1P22518 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk1P22518 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk1P22518 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk1P22518 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk1P22518 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clk1P22518 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.44■□□□□ 0.38
Clk1P22518 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk1P22518 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk1P22518 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk1P22518 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.44■□□□□ 0.38
Clk1P22518 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk1P22518 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.44■□□□□ 0.38
Clk1P22518 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clk1P22518 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk1P22518 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk1P22518 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clk1P22518 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk1P22518 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk1P22518 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk1P22518 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clk1P22518 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Clk1P22518 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk1P22518 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clk1P22518 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Clk1P22518 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk1P22518 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clk1P22518 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk1P22518 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.43■□□□□ 0.38
Clk1P22518 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clk1P22518 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clk1P22518 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk1P22518 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk1P22518 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk1P22518 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk1P22518 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Clk1P22518 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk1P22518 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.42■□□□□ 0.38
Clk1P22518 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.42■□□□□ 0.38
Clk1P22518 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Clk1P22518 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Clk1P22518 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.42■□□□□ 0.38
Clk1P22518 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.42■□□□□ 0.38
Clk1P22518 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk1P22518 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk1P22518 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clk1P22518 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.42■□□□□ 0.38
Clk1P22518 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Clk1P22518 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk1P22518 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk1P22518 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.42■□□□□ 0.38
Clk1P22518 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.42■□□□□ 0.38
Clk1P22518 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk1P22518 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clk1P22518 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Clk1P22518 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clk1P22518 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Clk1P22518 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.41■□□□□ 0.38
Clk1P22518 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk1P22518 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.41■□□□□ 0.38
Clk1P22518 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.41■□□□□ 0.38
Clk1P22518 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk1P22518 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk1P22518 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk1P22518 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Clk1P22518 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk1P22518 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.4■□□□□ 0.38
Clk1P22518 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk1P22518 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Clk1P22518 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clk1P22518 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
Clk1P22518 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Clk1P22518 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms