Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Gm7143-201ENSMUST00000222811 859 ntBASIC19.23■□□□□ 0.67
VimP20152 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VimP20152 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VimP20152 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VimP20152 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VimP20152 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VimP20152 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VimP20152 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VimP20152 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
VimP20152 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
VimP20152 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
VimP20152 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VimP20152 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
VimP20152 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
VimP20152 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VimP20152 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VimP20152 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VimP20152 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.21■□□□□ 0.67
VimP20152 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.21■□□□□ 0.67
VimP20152 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VimP20152 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.21■□□□□ 0.67
VimP20152 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
VimP20152 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VimP20152 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VimP20152 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VimP20152 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VimP20152 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VimP20152 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VimP20152 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
VimP20152 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VimP20152 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VimP20152 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VimP20152 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VimP20152 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VimP20152 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VimP20152 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VimP20152 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VimP20152 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
VimP20152 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VimP20152 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VimP20152 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VimP20152 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.2■□□□□ 0.66
VimP20152 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.2■□□□□ 0.66
VimP20152 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
VimP20152 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VimP20152 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VimP20152 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VimP20152 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
VimP20152 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VimP20152 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.19■□□□□ 0.66
VimP20152 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VimP20152 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VimP20152 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VimP20152 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.19■□□□□ 0.66
VimP20152 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.19■□□□□ 0.66
VimP20152 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VimP20152 AA386476-201ENSMUST00000098781 1665 ntBASIC19.19■□□□□ 0.66
VimP20152 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.19■□□□□ 0.66
VimP20152 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.19■□□□□ 0.66
VimP20152 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VimP20152 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VimP20152 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
VimP20152 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VimP20152 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VimP20152 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.18■□□□□ 0.66
VimP20152 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VimP20152 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VimP20152 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VimP20152 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VimP20152 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VimP20152 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
VimP20152 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VimP20152 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.18■□□□□ 0.66
VimP20152 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VimP20152 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
VimP20152 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VimP20152 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.18■□□□□ 0.66
VimP20152 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VimP20152 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
VimP20152 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VimP20152 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
VimP20152 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VimP20152 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VimP20152 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VimP20152 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VimP20152 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VimP20152 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VimP20152 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms