Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd48P18181 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd48P18181 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd48P18181 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cd48P18181 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cd48P18181 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd48P18181 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Cd48P18181 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cd48P18181 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd48P18181 Gm43137-201ENSMUST00000198052 594 ntBASIC16.9■□□□□ 0.3
Cd48P18181 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.9■□□□□ 0.3
Cd48P18181 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.9■□□□□ 0.3
Cd48P18181 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd48P18181 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Cd48P18181 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cd48P18181 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd48P18181 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd48P18181 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd48P18181 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd48P18181 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cd48P18181 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Cd48P18181 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cd48P18181 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd48P18181 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd48P18181 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Cd48P18181 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd48P18181 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Cd48P18181 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd48P18181 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd48P18181 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd48P18181 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd48P18181 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.89■□□□□ 0.29
Cd48P18181 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cd48P18181 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Cd48P18181 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cd48P18181 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd48P18181 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd48P18181 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd48P18181 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd48P18181 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.88■□□□□ 0.29
Cd48P18181 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd48P18181 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd48P18181 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cd48P18181 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd48P18181 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cd48P18181 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cd48P18181 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd48P18181 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd48P18181 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cd48P18181 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd48P18181 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd48P18181 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Cd48P18181 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd48P18181 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd48P18181 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cd48P18181 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Cd48P18181 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd48P18181 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cd48P18181 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.87■□□□□ 0.29
Cd48P18181 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cd48P18181 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cd48P18181 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd48P18181 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cd48P18181 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd48P18181 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cd48P18181 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cd48P18181 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd48P18181 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd48P18181 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cd48P18181 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd48P18181 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd48P18181 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cd48P18181 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.86■□□□□ 0.29
Cd48P18181 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.86■□□□□ 0.29
Cd48P18181 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cd48P18181 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cd48P18181 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Cd48P18181 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.86■□□□□ 0.29
Cd48P18181 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd48P18181 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd48P18181 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd48P18181 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Cd48P18181 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cd48P18181 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd48P18181 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cd48P18181 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cd48P18181 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.85■□□□□ 0.29
Cd48P18181 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd48P18181 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd48P18181 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd48P18181 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd48P18181 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd48P18181 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.85■□□□□ 0.29
Cd48P18181 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd48P18181 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cd48P18181 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd48P18181 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd48P18181 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd48P18181 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd48P18181 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms