Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Srp54P14576 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Srp54P14576 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Srp54P14576 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srp54P14576 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srp54P14576 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srp54P14576 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srp54P14576 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srp54P14576 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Srp54P14576 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
Srp54P14576 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srp54P14576 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.5■□□□□ 0.55
Srp54P14576 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srp54P14576 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srp54P14576 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srp54P14576 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.5■□□□□ 0.55
Srp54P14576 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.5■□□□□ 0.55
Srp54P14576 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Srp54P14576 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srp54P14576 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srp54P14576 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Srp54P14576 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Srp54P14576 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.5■□□□□ 0.55
Srp54P14576 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srp54P14576 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srp54P14576 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Srp54P14576 Gm13148-201ENSMUST00000118892 745 ntBASIC18.49■□□□□ 0.55
Srp54P14576 Gm12441-201ENSMUST00000121806 588 ntBASIC18.49■□□□□ 0.55
Srp54P14576 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srp54P14576 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srp54P14576 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srp54P14576 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srp54P14576 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srp54P14576 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.48■□□□□ 0.55
Srp54P14576 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srp54P14576 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srp54P14576 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srp54P14576 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Srp54P14576 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.48■□□□□ 0.55
Srp54P14576 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.48■□□□□ 0.55
Srp54P14576 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srp54P14576 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srp54P14576 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Srp54P14576 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.47■□□□□ 0.55
Srp54P14576 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.47■□□□□ 0.55
Srp54P14576 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srp54P14576 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Srp54P14576 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Srp54P14576 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Srp54P14576 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srp54P14576 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Srp54P14576 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Srp54P14576 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Srp54P14576 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Gm4968-201ENSMUST00000071458 858 ntBASIC18.46■□□□□ 0.55
Srp54P14576 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Srp54P14576 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.45■□□□□ 0.54
Srp54P14576 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Gm6211-202ENSMUST00000167849 925 ntBASIC18.45■□□□□ 0.54
Srp54P14576 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Srp54P14576 Gm5408-201ENSMUST00000197998 747 ntBASIC18.45■□□□□ 0.54
Srp54P14576 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Srp54P14576 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Srp54P14576 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.44■□□□□ 0.54
Srp54P14576 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srp54P14576 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.44■□□□□ 0.54
Srp54P14576 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Srp54P14576 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Srp54P14576 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.44■□□□□ 0.54
Srp54P14576 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Srp54P14576 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms