Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.24■□□□□ 0.67
Rc3h2P0C090 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h2P0C090 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h2P0C090 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h2P0C090 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.24■□□□□ 0.67
Rc3h2P0C090 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rc3h2P0C090 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rc3h2P0C090 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h2P0C090 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h2P0C090 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h2P0C090 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.23■□□□□ 0.67
Rc3h2P0C090 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.23■□□□□ 0.67
Rc3h2P0C090 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h2P0C090 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h2P0C090 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rc3h2P0C090 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.23■□□□□ 0.67
Rc3h2P0C090 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rc3h2P0C090 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rc3h2P0C090 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h2P0C090 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h2P0C090 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h2P0C090 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h2P0C090 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rc3h2P0C090 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rc3h2P0C090 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h2P0C090 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h2P0C090 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h2P0C090 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h2P0C090 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h2P0C090 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h2P0C090 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rc3h2P0C090 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Gm26524-201ENSMUST00000192339 390 ntBASIC19.21■□□□□ 0.67
Rc3h2P0C090 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rc3h2P0C090 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.2■□□□□ 0.66
Rc3h2P0C090 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.2■□□□□ 0.66
Rc3h2P0C090 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Rab3c-203ENSMUST00000224180 967 ntBASIC19.2■□□□□ 0.66
Rc3h2P0C090 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rc3h2P0C090 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.19■□□□□ 0.66
Rc3h2P0C090 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.19■□□□□ 0.66
Rc3h2P0C090 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rc3h2P0C090 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.18■□□□□ 0.66
Rc3h2P0C090 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rc3h2P0C090 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rc3h2P0C090 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms