Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.03■□□□□ 0.64
Hoxa9P09631 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa9P09631 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa9P09631 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Hoxa9P09631 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Hoxa9P09631 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Hoxa9P09631 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa9P09631 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Hoxa9P09631 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hoxa9P09631 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa9P09631 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa9P09631 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.02■□□□□ 0.64
Hoxa9P09631 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa9P09631 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Hoxa9P09631 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa9P09631 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Hoxa9P09631 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa9P09631 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hoxa9P09631 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa9P09631 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hoxa9P09631 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hoxa9P09631 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hoxa9P09631 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hoxa9P09631 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Hoxa9P09631 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.02■□□□□ 0.63
Hoxa9P09631 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Hoxa9P09631 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Hoxa9P09631 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa9P09631 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa9P09631 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa9P09631 Gm13168-201ENSMUST00000121771 632 ntBASIC19.01■□□□□ 0.63
Hoxa9P09631 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.01■□□□□ 0.63
Hoxa9P09631 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa9P09631 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hoxa9P09631 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.01■□□□□ 0.63
Hoxa9P09631 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Hoxa9P09631 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.01■□□□□ 0.63
Hoxa9P09631 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.01■□□□□ 0.63
Hoxa9P09631 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Hoxa9P09631 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa9P09631 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa9P09631 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa9P09631 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa9P09631 Gm37856-201ENSMUST00000191634 999 ntBASIC19■□□□□ 0.63
Hoxa9P09631 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hoxa9P09631 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa9P09631 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hoxa9P09631 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hoxa9P09631 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hoxa9P09631 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
Hoxa9P09631 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa9P09631 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.99■□□□□ 0.63
Hoxa9P09631 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa9P09631 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa9P09631 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa9P09631 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa9P09631 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa9P09631 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hoxa9P09631 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.99■□□□□ 0.63
Hoxa9P09631 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa9P09631 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa9P09631 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa9P09631 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa9P09631 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa9P09631 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.98■□□□□ 0.63
Hoxa9P09631 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.98■□□□□ 0.63
Hoxa9P09631 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.98■□□□□ 0.63
Hoxa9P09631 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Hoxa9P09631 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Hoxa9P09631 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa9P09631 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hoxa9P09631 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.98■□□□□ 0.63
Hoxa9P09631 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.97■□□□□ 0.63
Hoxa9P09631 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa9P09631 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa9P09631 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa9P09631 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa9P09631 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa9P09631 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.97■□□□□ 0.63
Hoxa9P09631 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.97■□□□□ 0.63
Hoxa9P09631 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.97■□□□□ 0.63
Hoxa9P09631 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa9P09631 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.97■□□□□ 0.63
Hoxa9P09631 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa9P09631 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa9P09631 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hoxa9P09631 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hoxa9P09631 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Hoxa9P09631 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa9P09631 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Hoxa9P09631 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa9P09631 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.96■□□□□ 0.63
Hoxa9P09631 Trmt13-210ENSMUST00000198454 880 ntBASIC18.96■□□□□ 0.63
Hoxa9P09631 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa9P09631 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
Hoxa9P09631 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa9P09631 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa9P09631 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hoxa9P09631 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.96■□□□□ 0.63
Hoxa9P09631 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms